Scytonema sp. HK-05: SAMD_17860
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Entry
SAMD_17860 CDS
T09974
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMD_17860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_17860
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMD_17860
DNA repair and recombination proteins [BR:
scyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMD_17860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAY44190
LinkDB
All DBs
Position
complement(2079388..2080170)
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AA seq
260 aa
AA seq
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MKIATWNVNSIRTRLGHVVDWLSQNHVDVLCMQETKVVDEKFPCAAFEQLGYHLYLSGQK
AYNGVAIASREPLEDVSRGFTPILLDVQPDWDEQKRVITGVIHGIRIVNLYVPNGSAVGS
EKYEYKLGWLTVLQEYLRSLLLSSPAICMCGDFNIALEDNDIHNSVSTENHIMASEAERQ
ALRDILLLGFADAFRKFTSEGGHYSWWDYRAVSFRRNLGWRIDHHYLTPNLYERAKSCTI
DVAPRKLAQPSDHTPVIVEF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctacttggaatgtcaactcgattcgcactcgtcttggacacgttgttgat
tggttgagtcaaaatcacgttgatgtcctgtgtatgcaagaaacgaaagttgtagatgag
aaatttccctgtgctgccttcgagcaattgggctaccatctttatttatcaggacaaaaa
gcttacaacggtgttgccatagcaagccgtgaaccactagaagatgtcagccgtggtttt
acgcctattttgttagatgtgcagccagattgggatgagcaaaaacgggtaatcacaggt
gtgattcacggtatcagaattgtcaatctttacgtaccgaatggttcagctgtggggagc
gagaaatatgaatacaagctgggttggttaacagtgctgcaggagtatttgcgatcgctt
cttttatcctcacctgctatctgtatgtgtggagactttaacattgctctagaagataat
gatattcataatagtgtgagtactgaaaatcacattatggcatcagaagcagagcgccaa
gcgttacgagatattctcttattaggatttgctgatgcttttcgcaaatttacctctgaa
ggcggacactatagttggtgggactatcgagccgtatcttttcggcgtaacttgggttgg
cgtattgaccatcactatcttacacccaacttatatgagcgtgctaagagctgcactatc
gatgtagctcccagaaagttagctcaaccgagcgatcatacgccagtgattgtcgaattc
tag
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