Scytonema sp. HK-05: SAMD_18190
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Entry
SAMD_18190 CDS
T09974
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00190
Oxidative phosphorylation
scyt00860
Porphyrin metabolism
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
scyt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SAMD_18190
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SAMD_18190
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scyt01006
]
SAMD_18190
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
scyt03029
]
SAMD_18190
Enzymes [BR:
scyt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
SAMD_18190
Prenyltransferases [BR:
scyt01006
]
Compound prenylation
Protoheme farnesyltransferase
SAMD_18190
Mitochondrial biogenesis [BR:
scyt03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
SAMD_18190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
BAY44223
LinkDB
All DBs
Position
complement(2115695..2116639)
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AA seq
314 aa
AA seq
DB search
MIENTAVRHHQNFLQVIQSYYQLTKPRIIPLLLMTTAASMWIASEGNVNPVLLLVTLCGG
TFAAASAQTINCIYDRDIDDQMERTRHRPLVSGRIQPSHALIFAIALACLSFSLLAVFVN
LLSALLTMSGIIFYIGVYTHLLKRHNSANIVIGGAAGAIPTLVGWAAVTDTLSWAAWLLF
AIIFLWTPPHFWALALMIRDEYAKVSVPMLPVVAGNVAATRQIWVYSLLLIPTTFLLVYP
LAVTGAVYACIALVLGAIFIKKAWALLHNPDDKQLARSLFLYSIFYMMLLCVGMVIDSLP
LTHRLIGAILDLRF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgagaataccgctgtacgccaccatcaaaactttttacaagtcattcagagttac
tatcaactcacaaagcctaggattatcccgctgctcctcatgacgactgctgctagtatg
tggattgcatccgagggaaacgtcaacccagtattgctgcttgtgactctctgtggcggg
actttcgccgctgctagcgcccagacaattaactgtatctatgaccgggacattgatgac
caaatggaacgcacgcgtcatcgacctttggtttccggtcgcatacagccatctcatgct
ttgatatttgcgatcgcacttgcttgtctttccttcagcctacttgctgtgttcgtcaac
ttgctaagtgctttattaacaatgtccggtattatcttttatataggcgtctacactcac
ttactcaaacgccataattctgcaaacatcgtcattggtggtgctgctggagcaattccg
accttagtaggttgggcggcggtaacagatactttaagctgggcagcatggttactattt
gcgatcatattcttgtggacacctccccatttctgggctttagcattgatgatccgtgac
gagtatgccaaagttagtgtaccgatgcttcctgttgtcgctggtaatgttgctgcgact
cgtcagatttgggtgtactctttgcttcttatccccactacatttttactcgtctatccg
cttgctgttactggtgctgtttacgcctgtatcgcccttgtactaggggctattttcatc
aaaaaagcttgggcgcttttgcacaatccagatgataaacaactagcgcgttctctattt
ctctactcaattttttatatgatgttgctatgcgttggaatggtgattgatagcttgccg
ttaactcatcggctaatcggagcaattttagatttgagattttag
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