Scytonema sp. HK-05: SAMD_19260
Help
Entry
SAMD_19260 CDS
T09974
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_19260
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAMD_19260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BAY44330
LinkDB
All DBs
Position
complement(2232597..2233529)
Genome browser
AA seq
310 aa
AA seq
DB search
MVSGVRAMPIEEIINIDFTQEDACSQILPRSPLASSYHANWDGIRLDHHQQPAFDTPEHT
PQQHVIGVSLTKQSINAERVLNGHVQHECIKYGDVAVVPANSYHKSSWDLEAEFLILSLE
KALFARAAYDSVDLQQMEIIPHFAAADPLIQQIGLALHSELESDGKGSRVYIESLATTLC
IHLLKHYSALSPKIARHSDSEGLSRLKLQQTIEYINQNLEKDLGLAEIATAVGMSMYYFS
RLFKQSTGFSPHQYVMNCRIERAKRLLAKTEEAIDQICEQVGFQSQSHFTNVFRKLIGTT
PNAYRKQVKI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggtttctggggtgagagcgatgccaatagaggaaatcataaatattgattttactcag
gaagatgcctgttcacaaattcttccgcgatcgccccttgcgtccagttaccatgccaac
tgggatggtatccgcttagatcatcatcaacagccagcttttgacacaccagaacatact
cctcaacagcacgtcattggtgtcagcctgacaaaacagtctattaacgcagaacgggtg
ttgaatggacacgttcagcatgagtgtatcaaatatggcgatgttgcagtcgttccagca
aacagttaccacaaaagcagttgggacttagaagctgaatttttaatcctgagtttggaa
aaagctttatttgctcgtgctgcctacgattcagtcgatttgcaacagatggagattata
ccacattttgctgccgcagacccgctgattcagcaaattggactggcgctacactcagaa
ctggaatcagatggcaaaggtagccgtgtttacatcgaatctctcgcaaccaccctctgc
attcatttactaaagcactattctgcactttcccccaagattgccagacattccgattcc
gaagggctttcgcgtttgaagttgcagcaaacaattgagtatatcaatcaaaacttagaa
aaagatttaggcttggctgaaattgccactgctgtgggaatgagtatgtattatttctca
cgcctatttaaacaatcaactggtttttcgccgcatcaatacgtgatgaattgcagaata
gagagagcgaaaaggttattggctaaaacagaagaagcaatagaccaaatctgtgagcaa
gtaggttttcagagtcaaagccacttcacaaacgtctttcgtaagctcataggtacaaca
cctaacgcttatagaaaacaggtgaaaatttag
DBGET
integrated database retrieval system
