KEGG   Scytonema sp. HK-05: SAMD_19530
Entry
SAMD_19530        CDS       T09974                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
scyt  Scytonema sp. HK-05
Pathway
scyt02024  Quorum sensing
scyt03060  Protein export
scyt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:scyt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SAMD_19530
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SAMD_19530
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAMD_19530
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scyt02044]
    SAMD_19530
Enzymes [BR:scyt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     SAMD_19530
Secretion system [BR:scyt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SAMD_19530
  Eukaryotic Sec-SRP protein
   SAMD_19530
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA ArsA_ATPase AAA_33 AAA_16 nSTAND3 AAA_25 PTH2 AAA_30 ParA 6PF2K ATPase AAA_24 APS_kinase PucR AAA_19 AAA_28 PARP_reg
Other DBs
NCBI-ProteinID: BAY44355
LinkDB
Position
complement(2252535..2253989)
AA seq 484 aa
MFEALADRLESTWKKLRGQDKISQSNIQEALREVRRALLEADVNLQVVKDFVTEVEAKAQ
GSEVIAGVQPDQQFIKIVYDELVKVMGEENVPLAEVQQPPTVVLMAGLQGTGKTTATAKL
ALHLRKLERSCLMVATDVYRPAAIDQLVTLGKQIDVPVFELGSDADPVEIARQGVERGRA
EGIDTVIIDTAGRLQIDQDMMAELARIKETVQPNETLLVVDAMTGQEAANLTRTFHEQIG
ITGAILTKLDGDSRGGAALSVRHISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVL
TLVEKAQEEIDLADAQKMQEKILSAKFDFTDFLKQMRLLKNMGSLGGIMKLIPGMNKLSD
EQLKQGETQLKRCEAMINSMTRQERTNPDLLASSPSRRRRIANGSGYKEADVSKLVSDFQ
KMRNLMQQMGQGSFPGMPGMFGGMGNPGAALNRPAAPGWRGYSGGATSKKKPKKDKKKKG
FGTL
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtttgaagcactagctgaccgtttagaatctacctggaagaaactccgaggtcaggac
aaaatttcccaatccaatattcaagaagctttgcgggaagtccgtcgcgccctgttagaa
gcggatgtcaatctccaggtagttaaagattttgtcaccgaagttgaagccaaggcacag
ggatcagaggtcatcgctggcgtacaacccgaccaacagttcatcaaaattgtctacgat
gagctggtaaaggtgatgggggaagaaaacgttcctttagcagaggttcagcagcctcct
acagttgtgctaatggcggggttgcagggtactggtaaaacaactgcgactgccaagtta
gccttgcatctacgtaaattagaacgtagctgcttaatggtggcgacagacgtgtatcgt
ccagcagcgatcgaccaactggtgacactaggtaagcaaattgacgtgccagtatttgag
ctaggatctgatgctgacccggttgaaattgcgcggcagggtgtggaacgcggcagagca
gaaggaattgatacagtcattattgatactgcgggtcgcttgcaaatagaccaagatatg
atggcggagttagcccgcattaaagaaactgtccaacccaatgaaacgctgttggtagtg
gacgcgatgactggtcaagaagcagccaatttgacccgcactttccacgaacagattggc
atcactggtgcaattctcaccaagttggatggcgatagccgaggtggagcagcactgtct
gtgcggcacatctcaggagcaccgatcaagtttgttggtgtgggtgaaaaggttgaggct
ctgcaaccattttatcctgagcgcatggcatcgcgcattttaggaatgggcgatgttctg
acgttggtagaaaaggctcaggaagaaattgaccttgccgatgcccagaaaatgcaggag
aaaatcctgtcagctaagttcgactttactgactttcttaagcaaatgcgcctgcttaag
aacatgggttcgctgggaggaatcatgaaactgattccagggatgaacaagctgtcagat
gaacaactcaagcaaggcgaaactcagcttaagcgctgtgaagcgatgattaattctatg
acccgccaagaacgcactaaccccgatttgttagcaagttctcctagtcggcggcggcgg
attgctaatggatctggctataaggaagcagatgttagtaagctggtgagtgacttccaa
aaaatgcgtaatctcatgcagcaaatgggtcaaggaagctttcctggtatgccaggaatg
ttcggtggtatgggtaacccaggggctgcccttaaccgtccagctgcccctggttggcgg
ggttatagtggcggtgctacctccaaaaagaagccgaagaaagacaaaaagaagaaaggc
ttcggtacgctttag

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