Scytonema sp. HK-05: SAMD_19890
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Entry
SAMD_19890 CDS
T09974
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
scyt03012
]
SAMD_19890
03029 Mitochondrial biogenesis [BR:
scyt03029
]
SAMD_19890
Translation factors [BR:
scyt03012
]
Eukaryotic type
Initiation factors
MTIFs
SAMD_19890
Prokaryotic type
SAMD_19890
Mitochondrial biogenesis [BR:
scyt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
SAMD_19890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
IF2_N
MMR_HSR1
GTP_EFTU_D2
Ras
Roc
Arf
RsgA_GTPase
FeoB_N
HTH_Mga
SRPRB
GTP_EFTU_D4
MMR_HSR1_Xtn
tRNA_edit
Motif
Other DBs
NCBI-ProteinID:
BAY44390
LinkDB
All DBs
Position
complement(2298752..2301949)
Genome browser
AA seq
1065 aa
AA seq
DB search
MNNGKVRIYELSKELNLDNKELLAICDQLNIAVKSHSSTITESEAERIRTQAEKVAATSV
TSQRDNGANSHRPNSSQDGGRNRPAAPNKQQILEIRKPKVLKNPISNAPEASVATNIQAA
SEVNPPSPPNPFATPVSPMKPTAPIRPVPRNQSETTPQQSAVTDADKDKARSTNQPVEKV
AAEKPEKVAVPKPKAERPPKPQLSAPPTRPAGVDDTNPPADDPQPTVSEKPVLKRDRDQV
KPQKVNKPTTGEAQTAPSAKPEKPVRSSPSPGRPEPRGNRPSAPAIVGDSQRPTRPVVRS
GEQPVAAGASLIATPPKPMRVVSPTKPQAGQEEEDDDAVTTTTTDEVLELKRPTPPRQIN
KGGKKWQEEEIDEIKESAKAKVAAKGKRLKPIVDEFEDEDLLEEEGLDIPATIQVSLSIA
RPPKPKAAKPTQPVAATAVAPVAKGKKPPSSREQNQNRRRETEQKPDRPEILEVTGPMTV
QELAEALAMADTEIVKILFMKGMAVSITQNLDIPTITLVANELEIPVETVEREAEARKVT
EMIDVADLEYLHRRPPVVTIMGHVDHGKTTLLDSIRKTKVASGEAGGITQHIGAYHVDVE
HDGKVQQVVFLDTPGHEAFTAMRARGARVTDIAILVVAADDGVRPQTVEAISHAKAAEVP
IVVAINKVDKPEAQPDRVKQELTEYALVPEEWGGDTIMVPVSAIKGENLDTLLEMILLVA
EIEELSANPDRLAKGTVIEAHLDKAKGPVATLLIQNGSLHVGDLLVAGSAFGKVRAMVDD
RGKRVDAATPSFAVEVLGLSDVPAAGDEFEVFSNEKQARSIASDRADKQRQSRLMQGRIT
LTSISAQAQEGELKELNLILKGDVQGSVEAIVGSLRQIPQNEVQIRLLMATAGEITQTDI
DLAAASGAVIVGFNTTYASGARQAADEAGVDVREYNIIYKLIEDIQGALEGLLEPELAEE
HLGQAEVRAVFPVGRGSVAGCYVQSGKLTRNCKVRVRRNGKVIYEGVLDSLKRMKEDVRE
VNSGYECGIGIDKYNEWAEGDIIEGFQMVTKRRTLSSTRQGVNER
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcaaagttagaatttacgaattatcaaaggaattgaatttggataacaaa
gagctattagcaatttgcgaccagctcaatattgcggtcaaaagtcatagcagcacgatt
acagaatccgaggcagaacgcattcggactcaagcagaaaaagttgcggcgacaagcgtg
acgtcgcaaagggataatggcgcaaacagccatagaccaaattcatcacaagatggtgga
cgtaaccgaccagctgcacctaataaacaacaaattttggagattcgcaaacctaaagtt
ttgaaaaaccccatctctaacgccccagaggcgtcggttgctaccaatatacaagctgct
tctgaagttaatcctccttcaccccctaatcccttcgctaccccagtctcaccaatgaag
ccgacggcaccaattcgacctgtaccccggaatcagtctgagaccacacctcaacaaagt
gctgtgacagacgcggataaagacaaagcacgcagtacaaatcagccggttgaaaaagtc
gcagcggaaaaaccagaaaaagtagcagtaccaaaaccaaaagcggaaagacccccaaaa
ccgcaactgtctgccccgccgacaagacctgctggtgtggacgacacgaaccctccagca
gatgatccccaaccgacggtcagcgaaaaaccggtcctcaaacgcgatcgcgaccaagtt
aagccgcaaaaggtcaacaaaccgacaacaggggaagcacagactgctccatcggcaaaa
cctgaaaaacctgtgcgttctagtccatcgccgggtagacctgagccaagggggaataga
ccttctgcacctgcaatagtgggagactcgcaacgacccacaagaccagtagtacgttct
ggtgaacagccagtagctgcgggtgcatcgctgattgcgactcctccaaaaccgatgcgg
gtcgtctcaccgaccaaaccgcaggcagggcaagaggaggaagacgatgatgcagtaacg
acgactacgactgatgaagtccttgaactcaagcgcccaacaccgccacgtcaaattaat
aaaggcggtaagaagtggcaggaagaagaaatagatgaaattaaagagtcagctaaggct
aaggtagccgctaaaggcaaacgtctcaagccgatagttgatgagtttgaggacgaagat
ttactagaagaagagggactggacataccagcgaccatccaagtcagcctctcgatcgcc
cgtccgcccaaacccaaggcagccaagccaacacaacctgtagcagccacagctgtcgcg
ccagttgctaaaggtaaaaagccgccttcctctcgcgagcaaaaccaaaaccgtcgccgc
gaaacggaacaaaagcccgatcgtccagaaatactggaagtcacaggtccgatgacagtg
caagaactggctgaagccttggcgatggcggacacagagattgtgaaaatcctgttcatg
aaaggtatggcggtgagtatcacccaaaatttggatattcccacaattaccttggtagcc
aacgagttggaaataccagtcgaaaccgtcgaacgagaagcagaagcccgcaaagtcacc
gaaatgatagacgtggcagacctggaatacctccatcgccgtccgccagttgtgacaatt
atgggtcacgtagaccacggaaaaacgacgctgcttgactcgattcgcaaaacaaaagtg
gcatctggcgaagcaggtggtattactcagcacatcggagcttaccacgtagatgtggaa
cacgatggcaaggttcaacaagtagtattcttggatacccctggtcacgaagcctttaca
gctatgcgggcgcgtggagcgcgagtgaccgacattgctattttggttgtcgctgccgat
gatggcgtccgtcctcagaccgttgaagcgattagccacgccaaagcggctgaagttcct
atcgtggttgccatcaataaagttgacaaaccagaagcacagcctgaccgtgtgaagcaa
gaattaacggaatacgctctggtgccagaagagtggggtggcgacaccattatggttccc
gttagcgccattaagggtgaaaacctcgatacactcctagagatgattctcttggtagca
gaaatagaagaactttctgccaacccagaccgactcgcgaaaggaaccgtgattgaagct
cacctggataaggcaaagggaccagttgcgaccctgctgattcagaatggtagcctacac
gttggtgatttgttggtagcgggctcagcgttcggtaaagtccgggcaatggtggatgat
agaggtaaaagagtcgacgcggctactccctcattcgctgttgaggtgttgggcttaagt
gatgtaccagcagcaggcgatgaattcgaggtcttcagcaacgaaaaacaagcacggtca
attgcttccgatcgcgccgataaacagcgtcaatcccgcctcatgcagggacgcattacc
ttgacaagtatctcggctcaagctcaagaaggcgagttgaaagaactcaacctgatcttg
aaaggagacgtacaaggttccgtagaagccattgtgggatcgctgcggcaaattccccaa
aacgaggtacaaatccgcttgttgatggcaactgctggtgaaattacccaaaccgatatc
gacttagctgcagctagtggagccgtcattgttggctttaacaccacttacgctagtggc
gcaagacaagccgccgatgaggctggtgtagatgtgcgggaatacaacatcatctacaaa
cttatagaagatatccaaggagccttggaaggtctattggagccagagttggcggaagaa
cacttgggtcaagccgaagtgcgtgctgtcttcccagttggtcgtggttctgttgccggt
tgttacgtgcagtctggcaaactcacccgcaactgcaaagtgcgagtgcgtcgtaacggt
aaggtgatctatgaaggcgtccttgactcgctcaagcgaatgaaagaagacgtccgcgaa
gttaactcaggttacgaatgcggtatcggcattgacaaatacaatgaatgggctgaaggt
gacatcatcgaaggcttccagatggtgaccaagcgccgtactctttcatctactagacag
ggagttaatgaaaggtga
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