Scytonema sp. HK-05: SAMD_22330
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Entry
SAMD_22330 CDS
T09974
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_22330
DNA repair and recombination proteins [BR:
scyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMD_22330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
Lon_C
nSTAND3
GvpD_P-loop
AAA_29
DUF7125
NTPase_1
AAA_22
ATPase_2
MCM
AAA_5
AAA_24
AAA_14
ABC_tran
DZR
NACHT
AAA
AAA_18
zf-RING_10
PAXNEB
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
BAY44632
LinkDB
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Position
complement(2593774..2595318)
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AA seq
514 aa
AA seq
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MAKPKSYFVCNECGAESPQWFGKCAACGTYNSLEEQISIQSSTDIPSRGMSGWHQQTNSK
PAATKPAKPRASLTFDQISDRQVTRWASGYEELDRVLGGGVVPGSMVLIGGDPGIGKSTL
LLQVSNLLSHRYRILYVSGEESGQQVKLRASRLGVGKPLNLVGDGNGNDTAAKEALEEIP
KVEDADSIGADLYVLPETDLEEILREMDSLKPNVTVIDSIQTVFFPALTSAPGSVAQVRE
CTAALMKVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRLLRTVKN
RFGATHEIGIFEMVDNGLREVPNPSELFLGNRDDPAPGTAIVVACEGTRPIVVELQALVS
PTSYPSPRRAGTGIDYNRLVQILAVLEKRVGIPMSKLDSYVASAGGLNVEEPAVDLGIAI
AIVASFRDRIVDPGTVLIGEVGLGGQVRSVSQMELRLKEAAKLGFKRAIVPKGQKYPNLD
IEILPVSKVIDAIIAAIPQQGLTEEDLVPDDDEE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctaaaagttatttcgtttgtaacgaatgtggtgcagaatccccccaatgg
tttgggaagtgtgcagcttgcggcacttacaattccttagaagagcaaattagtatccag
tcctcaaccgatataccaagtcgcggaatgagtggatggcatcaacagacgaacagcaaa
cctgcagcaacgaaaccagctaaaccacgagcctcattgacatttgaccagattagcgat
cgccaagtcacacgctgggcttctggctatgaggaactagatcgagtcctgggcggtgga
gttgttcctggttctatggtgttgataggcggcgatccaggaataggcaaatctacactg
ctgttgcaagtatcgaatctactgtcgcacagataccgcatcctctacgtttctggagaa
gaatcaggacaacaggtaaaattaagagcttctcgcttgggcgtgggaaaacccttgaat
ttagtaggcgatggcaacggcaatgacacagcagcaaaagaagccctcgaagaaattccc
aaagtagaggacgctgacagcataggtgctgatttgtatgttttgccagaaacagacttg
gaagaaatcctccgagagatggattcactcaaaccaaacgtcacggtcattgatagtatt
caaacagtgttctttccggctttgacctctgcacccggttctgttgctcaagttcgcgaa
tgtacggcagctttgatgaaggtggcaaagcacgaggacatcacaatgttaatcgtggga
cacgtgacgaaagaaggggcgatcgccggaccaaaagttttggaacatttagtggataca
gtgttgtattttgaaggcgatcgctttgcctcccatcggttattacggacagtgaaaaac
cgttttggcgcaactcacgaaatcggcatctttgaaatggtagacaacggactgcgagaa
gtccccaacccttcagagctatttttaggaaaccgggatgatccggctcccggtactgca
attgtcgttgcttgcgagggaacgcgcccgattgttgtggagttgcaagcactggtgagt
cccactagctacccatccccgcgtcgtgcgggcacaggtatagattataaccgcttagtg
caaatattggcagtgttagaaaaacgggtgggtatcccgatgtccaagctagattcttac
gttgcgtctgcgggtgggttgaatgtagaagaaccagccgtggatttaggaatagcgatc
gcaattgttgccagttttcgcgacaggattgttgatcctggtaccgtactgattggggaa
gttgggctaggaggacaagtccgttcagtatcgcaaatggaactgcggttaaaagaagcg
gcaaaactgggatttaagagggcgatcgtcccaaaagggcaaaaataccccaaccttgac
atcgaaattttgccagtatccaaggtcatagatgcgattattgcagcaataccccagcag
ggattgaccgaagaagatttggtacccgatgacgatgaggagtag
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