Scytonema sp. HK-05: SAMD_22410
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Entry
SAMD_22410 CDS
T09974
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
scyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_22410
03070 Bacterial secretion system
SAMD_22410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_22410
02044 Secretion system [BR:
scyt02044
]
SAMD_22410
Transporters [BR:
scyt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMD_22410
Secretion system [BR:
scyt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMD_22410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C70
Peptidase_C39_2
AAA_22
DUF3335
NB-ARC
AAA_29
RsgA_GTPase
Guanylate_cyc_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAY44640
LinkDB
All DBs
Position
2602230..2605304
Genome browser
AA seq
1024 aa
AA seq
DB search
MSLVIVQQQLYQQLTTALGETISQEELAECLTETEIVEPAPTKQFWLSGDSPGIYLIISG
KVRLLDSAENLITTLGPESLFGEATLFPEQGFVPYVAKASTNLKLCYLKQEILQGLMEKY
PSIRDYLWKRAQLWDLLMIYRQNSQLECQPSDVPGMLKALSYFSQHTLDINEEISAPSDG
KLWLLHKGELRHTDGQCLTPGKIYADLKQGVWQATKPTSVYILRDSHWQTVLGHWHQLAQ
LVVPQQRPLVMEDQKPRSVRSKPERIATSGNVIPFPQRESASKQKPTKSRPYFPSPKAKV
GQVWGRISRSYPYFAQQSAADCGAACLVMIARYWGKRLSVNRLRELTNVNRSGASLRALA
ATAESVGFASRPVKASFDKLAEQPLPAIAHWEGKHYIVVYEITKKRVIVGDPAIGQRTLT
PKEFQAGWTGYALLLQPTALLKEAEEETTGIWRFFELIKPHFWVLLEVFLASVLIQVFGL
VTPLFTQLLLDKVIVQGSTSTLNAVALGLLIFGLFSIAVNGVRQYLLAHTANRVSVALLV
GFIKHTLRLPLSFFESRYVGDIVSRIQENQKVQRFLTGETLSVILDLLTVVVYVGLMFWY
NWRMALLGLMIVPPFFILTLASTNILRRMSREIFNAGAEENSYLIQSLTGIRSIRSMAIE
HTVRWRWEELLNTLVKKTFTAQVIGNNLQITGAVIDTVMHTLLLWYGSWLVIHNELTIGQ
LIAFNMLLGNVLSPFKRLSVVWNQFQEIVISVERINDVLDAEPEEDLQNKPRKPLRRLQG
RIRFENLTFRYHPESENNVLENLSFEIQPEQTVAVVGRSGSGKTTLSKLILGLYPPTEGK
ILIDGHDVTGVSLKSLRQQVGVVDQDTFLFGGTIRENISIAHPEASLEQIIEAARMAGAD
EFIQQLPMGYETEIGEGGGMLSGGQRQRLAIARALLGNPRFLIFDEATSNLDAESERIIQ
NNLKTILKGRTSLIIAHRLSTVRNADLILVLDRGVLIESGTHDELIAKKGHYYYLNQQQL
AHAG
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggtgatagtgcaacagcagctatatcagcaactcaccacagctttgggtgag
acaatttcacaagaggaactggcagagtgcctcacggagacagaaatcgtggagcctgca
cccacaaagcagttctggctttcaggtgatagtcccggaatatatctcattatttctggc
aaagtcagactattggatagtgcggagaacttaattacaactctcggtccagagtcattg
tttggggaagcgactttatttccagaacaaggctttgtgccatacgtcgctaaagcttcg
acaaacctcaagctttgctatctcaaacaagagatactgcaaggattgatggagaaatat
cctagtatccgcgattacctgtggaaacgcgcgcaactgtgggatttgctgatgatatat
cggcaaaactcgcaactagagtgccagccatcggatgtaccagggatgctcaaagcctta
tcttatttctcgcagcataccttagacatcaatgaggaaatatctgcaccatcagatggc
aaactatggctgctgcacaaaggggaactgcggcatacagatggtcagtgtctcacacca
ggcaagatctatgcagatctaaaacagggtgtttggcaggcaacaaagccaaccagcgtt
tatattctccgagattcgcattggcaaacagtcttgggacactggcaccagctagctcaa
ttagttgtacctcaacagcgccctttggtcatggaagaccaaaagccacgttcagtcagg
tcaaaaccagaacgaatagccacttctggaaacgtcataccctttccccaacgcgagtcg
gcgtcaaaacaaaagccaacaaaatcacgtccctactttcccagcccgaaggccaaagta
gggcaagtgtggggacggatcagcagaagctatccatactttgcacaacaaagcgctgct
gactgtggtgctgcctgcctagttatgattgcacgctactggggcaagcgtttaagtgtc
aatcgactgcgggagttaactaacgtcaaccgttctggcgcatcactgcgtgctttagcc
gccaccgccgaaagcgttggctttgcctcccgtccagtcaaagccagctttgacaaattg
gcagagcaacccttaccagcgatcgctcactgggaaggcaaacactacatagtcgtctat
gaaatcaccaaaaaacgggtaattgtaggcgaccctgcgatcggtcaacgcaccctgacc
ccaaaggaatttcaagcaggttggactggatacgccttattgctgcaacccacagcccta
cttaaagaagctgaggaagagactacaggcatctggaggttttttgagttaatcaaaccg
cacttttgggtactgctggaagtgtttttggcttcagtgctgattcaggtgtttgggctg
gtgacgccgctgtttacccagttactgttagacaaagtgatagtgcaaggcagcacttct
acattaaacgccgtcgctttggggttgctcatttttggcttgttcagcattgctgtcaat
ggggtgcggcaatatcttttggctcacactgctaaccgtgtcagtgttgcactgctagtg
ggttttatcaaacataccttgcgcttaccgttatccttcttcgagtcccgctacgtcggg
gatattgtctctcgtatccaagaaaaccagaaagtacagcgcttcctgactggtgagaca
ctgtcagtcattctcgatttgctgacagtggtggtttatgtaggattgatgttctggtac
aactggcgcatggcattactgggcttgatgattgtgccaccattttttatcctgacactc
gcttccacaaacatcttgcgccggatgtccagagagattttcaatgccggagctgaagaa
aacagctatctcattcaatccctgacaggtattcgctcaatccgttctatggcgattgaa
cacacagtacggtggcgttgggaagaactgctcaatactttggtgaaaaaaacctttacc
gcccaggtgattggcaataacttgcaaattaccggtgctgtcattgacaccgtgatgcat
acgctattgctctggtatgggtcatggttggtcattcacaacgaactgaccatcgggcaa
cttatagcttttaatatgttattgggcaatgtcctcagccccttcaagcgactctcggtg
gtctggaatcaattccaagaaatcgtcatttctgtcgaacggattaacgatgtcctagac
gcagaaccagaagaagacttgcaaaataaaccccgcaagcctctgcgtcgccttcaaggg
agaattcgctttgagaatctcactttccgctatcacccagaaagcgagaataacgtcctg
gaaaatctcagctttgaaatccaacctgaacaaacagtcgcagtggtcgggcgcagcggt
tctggaaagacgactttgtcaaagttaattttgggtttatatcccccgacagagggcaaa
atcttaatcgatggtcatgatgtgacgggtgtgtccctaaaatcactccgacaacaagtt
ggtgtggtagaccaagacactttcttgtttggcggtacgattcgagaaaacatcagtatc
gctcatccggaagcctcactagaacagattatcgaggcagcacgtatggctggggcagat
gaatttattcagcaactgccaatgggttacgaaaccgaaattggtgaaggtggtggaatg
ctctctggcggacaacgccaacgtttagcgatcgcccgcgcattactagggaatccccga
tttttaatatttgatgaagctaccagcaacctggatgcggaatctgaacgcattattcaa
aacaatctaaaaactattctcaaagggcgcaccagtctgattattgcccatcgcctttcc
acggtgcggaatgccgacttgattttggtgttagaccgaggcgtcttgatagaaagcgga
acacacgacgaattaattgccaaaaaaggacattactactacctcaaccaacaacaactt
gctcatgcaggttga
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