Scytonema sp. HK-05: SAMD_22580
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Entry
SAMD_22580 CDS
T09974
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00220
Arginine biosynthesis
scyt00240
Pyrimidine metabolism
scyt00250
Alanine, aspartate and glutamate metabolism
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
scyt01240
Biosynthesis of cofactors
Module
scyt_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SAMD_22580 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAMD_22580 (carB)
00220 Arginine biosynthesis
SAMD_22580 (carB)
Enzymes [BR:
scyt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SAMD_22580 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_5
KDD_N
UvrA_DNA-bind
Motif
Other DBs
NCBI-ProteinID:
BAY44657
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All DBs
Position
complement(2623886..2627149)
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AA seq
1087 aa
AA seq
DB search
MPRRDDIKKILLLGSGPIVIGQASEFDYSGTQACKALREERYEVVLVNSNPASIMTDPEI
ADRTYIEPLTPELVEKVIAKERPDALLPTMGGQTALNIAVALAKNGVLEKYGVELIGAKL
PAIEKAEDRKLFNEAMTKIGVKMCPSGTASSLEEAKAIARHIGTYPLIIRPAFTLGGTGG
GIAYNEEEFAEMAQAGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENLDP
MGIHTGDSITVAPAQTLTDKEYQRLRDMAINIIREIGVETGGSNIQFAVNPVDGDVVVIE
MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIDNDITKKTPASFEPTIDYVVTKVP
RFAFEKFPGAEAVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDQKEKLPSG
EQIRAHLRTPNPERIFAVRHAMLLSMSIEEIYELTGIDPWFLDKMQELLEDEKFLKRTPL
QQLTKEQMYDVKRQGFSDRQIAFATKTTEDEVRAYRKQLGVIPVYKTVDTCAAEFEAFTP
YHYSTYEDETEVMPTDKPKVMILGGGPNRIGQGIEFDYCCCHAAFALKDAGYETIMVNSN
PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGVIVQFGGQTPLKLSLPLQKVLSTPN
SPLSTRIWGTSPDSIDIAEDRERFEKVLQELNIAQPPNGIARTYEDALVVAKRIGYPVVV
RPSYVLGGRAMEIVYSDAELERYMTFAVQVEPEHPILIDKFLENAIEVDVDAIADHTGRV
VIGGIMEHIEQAGIHSGDSACTIPSISLPPIVLEQIRSWTVELAKSLNVIGLMNIQFAVV
GTQSSSPQVYILEANPRASRTVPFVSKATGVPLAKLASLIMSGKTLEELGFTKEVIPAHI
AVKEAVLPFNKFPGTDIILGPEMRSTGEVMGIDNDFGRAFAKAVLGAGERLPMSGTVFVS
MNDRDKAAAVPVVKEFIDLGFAVMATDGTRRVLHEHGLDVELVLKLHEGRPHVLDAIKNH
RIQLIINTPSGEEAQSDGRLIRRTALAYKIPIITTIAGAKAIVAAIRSLQNTTLDVKVIQ
EYTTVSS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgtgacgatatcaagaagattttgctactcggttctggtccaatagtgatt
ggacaagccagcgagtttgactattctggcactcaagcttgtaaggcattgcgagaagaa
cgctacgaagtggtgctggtcaactcgaatcctgcctcaattatgacagatccggaaata
gcggatcgcacatacatcgaaccgctgacaccggaattggttgaaaaagtcatcgccaaa
gaacgccccgacgccctactaccgacgatgggaggacaaaccgccctgaacattgctgta
gctttagctaaaaatggggtgttggaaaagtacggcgttgaattgattggcgctaaactc
ccagccattgagaaagcggaagacaggaaactttttaacgaagcgatgacaaagataggg
gtgaagatgtgtcctagtgggacagcttcatctttagaagaagccaaggcgatcgccaga
cacattggcacctatcctctgattattcgtcctgctttcaccttaggtggtaccggaggc
ggtattgcctataacgaagaagaatttgcagaaatggcacaagcaggtatagatgcgagt
cccgtgtcgcaaatcctcatcgaccagtccctactcggctggaaagaatacgaactggaa
gtgatgcgcgacttggcagataacgttgtgattatctgttccatcgaaaaccttgacccg
atgggtatccataccggagactctattaccgttgccccagctcaaaccctcactgataaa
gaataccaacggctgcgggatatggcaattaacattatccgcgagattggcgtggaaact
ggaggttctaatatccagtttgcggtcaatcccgtagatggagacgtagttgtcattgag
atgaaccctcgtgtatcccgttcttcggctttggcttccaaagccacaggtttccccatc
gccaaaatggcggcgaagctggctgttggctacacgcttgatgaaattgacaatgacatc
accaagaaaacaccagcctcttttgaaccaactattgattacgtcgtcacaaaagttccc
cggttcgcctttgaaaagttccctggcgctgaagcagtgctgacaacacaaatgaaatcg
gtaggggaagcaatggcaattgggcggacttttaacgagtccttccaaaaggcgctgcgt
tccctggaaaccggacgtgcgggttggggttgcgaccagaaagaaaaattacctagtggt
gaacaaattcgcgcccatctgcggacaccaaaccctgaacgcatatttgctgtacgtcat
gccatgttgctaagcatgagtattgaggaaatctacgagttaacgggtattgacccatgg
ttcctcgataagatgcaggaactgctggaggacgagaagtttctgaagcggacaccgttg
cagcagttgacaaaagagcagatgtatgatgtgaagcggcagggatttagcgatcgccag
attgccttcgcgaccaaaaccaccgaagatgaagtccgtgcttaccgcaaacaactcggt
gtcataccagtttacaaaacagtagatacctgtgctgcggaatttgaggcatttactcct
tatcactattctacttacgaagacgaaacagaggtcatgcctacggataaacccaaggtg
atgattttgggtggtggtcctaaccgcattgggcagggtattgagtttgactactgttgt
tgtcacgccgcctttgctttaaaagacgcgggctatgaaacaattatggtcaactccaac
ccggagacagtttccacagattatgatacgagcgatcgcctgtattttgagcccctgaca
aaagaagatgtactcaatatcatcgaagcggaaaacccagttggggtgattgttcagttt
ggtggacaaactccattgaagctttcccttcccctacaaaaagttctcagcactccaaac
tcaccactcagcactcggatttgggggacttcaccagattctatcgacattgcagaagac
cgggaacggtttgagaaggttctccaagagttaaatattgcccaaccgcccaatggtatc
gcccgtacttatgaagatgctttggtcgttgccaaacgcattggttatccggtggtggtg
cgtcctagctacgtgttagggggaagggcgatggaaatcgtctactctgatgcagagttg
gaacgttatatgacttttgcagtgcaggtggaaccggaacacccgattctgattgataag
tttttggaaaatgccatagaagtcgatgtagatgcgatcgccgaccacactgggcgggtg
gttataggaggtataatggaacacattgaacaagcgggtattcactcgggagattctgcc
tgcaccataccttctatttctctaccaccaatcgttttggagcaaattcgttcttggacg
gtggagttggcgaagtcacttaatgtcatagggttgatgaatattcaatttgccgttgtt
ggcacgcaaagttcttcgccccaagtttacattctcgaagccaatcctcgcgcttctcgc
actgtaccatttgtatctaaagcaactggtgtgccattggcaaagctcgcatcattaatt
atgtcgggtaaaactttggaggagctaggcttcaccaaagaagtgattccagcccacatt
gccgtgaaagaagccgtattgccatttaacaaattccctggtaccgatattattttggga
ccagagatgcgttctactggcgaggtgatgggtattgacaacgactttggacgcgccttt
gccaaagcagtattgggcgctggtgagcgtttgcccatgagtggtacagtgttcgtatcg
atgaacgatcgcgataaagcagctgcggttcctgtggtcaaggaatttatcgatttgggc
tttgctgtgatggcgacggatggtacacgtcgcgttcttcatgaacacggcttagatgtg
gagttggtgctaaaactgcatgaaggtcgtcctcacgtcttagatgcaattaagaaccat
agaattcagttgattatcaacacgccttctggggaagaagcgcaaagtgatggtagactc
attcgccgtacagccttagcttacaaaatccccatcattaccacaattgctggagcaaaa
gccattgtcgctgctatccgttccttgcaaaatacaaccttagatgtgaaggttatccaa
gaatacacaacggtgagttcgtag
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