Scytonema sp. HK-05: SAMD_22960
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Entry
SAMD_22960 CDS
T09974
Name
(GenBank) oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMD_22960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_22960
Transporters [BR:
scyt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SAMD_22960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Cytomega_UL20A
Motif
Other DBs
NCBI-ProteinID:
BAY44695
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Position
2667011..2668798
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AA seq
595 aa
AA seq
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MNTGIFKQIFRRSWILALLGIWVTLALNGCNPSQFKSQAAQVPQLVRSMLSDPQTFNYPL
NQDASTTTLLGLLFDGLITQNLITGKVEPVLAESWQISDDKLRIVFTLREGLKWSDGQPL
TVDDVVFSYNDIYLNEAIPTDARDTLRIGESGKLPTVRKVDERRVEFSVPEPFRPFLLNT
GYPILPAHALQKSVKTKDTEGKPTFLAKWRIDTPPDQIIVNGPYKLERYETSQRVVLRRN
PYYWRKDDKGNSQPYIERMIWQIVESTDTSLVQFRSGSLDSVGVSPEFFSLLKRQEKQGK
FTIYNGGPAAGTNFVWFNLNKGKRNGKPLVNPVKSRWFNTVEFRQAIAYAIDRQTMINNT
FRGLGELQNSPISVQSPYYLSAKEGLKVYDYNPQKAKELLLKAGFKYNDRGELLDAEGNR
VRFTLVTNAGNKIREALGSQIKQDLSKIGIQVDFTPLAWSAFTDKVSNTLDWEAALMGLT
GGLEPNDGANVWAPEGGLHMFNQKPQPGQKPIQGWEVAPWEAEIAKLYIQAAREFDEAKV
KAIYAETQQITQEYLPFIYLVNAYSLAAVRDRVEGIQYSALGGPFWNIHEIKVTD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaatactggcatttttaaacaaatttttcgacgtagttggattttggctttactgggt
atttgggtaacgttagcactcaatggctgcaatcccagtcagtttaaaagtcaagctgct
caagtcccgcaattggtacgtagcatgctcagtgacccacaaacctttaactacccactc
aatcaagatgcatcaacaacaacccttcttggattactttttgacgggttaatcacccaa
aacctaataactggtaaagtcgagccagtcctagccgaatcctggcaaatttctgatgac
aaactacggattgtttttactctgcgcgagggtttgaaatggtctgatggacagccactt
acagtagatgatgtagtctttagttacaatgacatttacctcaatgaagcgattcctaca
gatgccagggacaccttgaggattggtgaaagtggaaagctacctactgtacgaaaagta
gatgaacgtcgggttgagtttagcgtaccggaaccttttagacctttcctactgaataca
ggttatccgattttgcctgcccatgcgctgcaaaaatcggtaaagactaaagatacagag
gggaagccgacctttctagcaaagtggcgcatcgatactcctccagaccaaattattgtc
aacggtccttacaagctagagcgttacgaaaccagccagcgtgtcgtgctccggcgcaac
ccctactactggcgtaaggatgataaaggcaattcccagccttatattgaacgcatgatt
tggcaaattgtggaatcaacagatacttccttggtgcaatttcgttctggcagcttggat
tctgtgggggtatcgccagaattcttttctttgctgaagcggcaagaaaaacaaggtaag
ttcacaatttacaatggtggtcctgctgctggtacgaattttgtttggttcaatctaaat
aaaggtaaaaggaacggcaagccgctcgtcaatcccgtaaagtcgcgttggttcaatact
gtagaatttcggcaggctatagcttatgcaattgaccgccaaacgatgattaacaatact
tttcgtggtttgggagaactgcaaaattctccaatttctgtgcaaagcccctattacctt
tcggctaaagaagggctgaaagtttacgattacaatccacaaaaggcgaaggaactgcta
ctgaaagcaggatttaagtataacgacagaggtgagctactagatgctgaggggaaccgc
gtccgcttcactttggtcaccaatgcaggaaataaaatccgtgaggcactaggatcgcaa
attaaacaagacttgagcaaaatcggtattcaagtcgattttaccccattagcatggagt
gctttcacagacaaagtttctaacaccttggactgggaagctgctctgatgggacttact
ggcgggttagaaccgaatgatggtgctaatgtctgggcaccagaaggtggattacatatg
tttaatcagaaaccccaaccaggacaaaagcccattcaaggttgggaggtggctccttgg
gaagcggaaattgcgaagctctacatccaagccgcacgggagtttgacgaagctaaggtt
aaagcgatttatgctgaaactcagcagattacccaggaatatttaccgtttatttaccta
gtgaacgcctattcattggcggcggtgcgcgatcgcgttgaaggcattcaatactctgcc
cttggcggcccattctggaacattcatgaaatcaaagtaacggattag
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