Scytonema sp. HK-05: SAMD_23000
Help
Entry
SAMD_23000 CDS
T09974
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_23000
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAMD_23000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HAAS
BET
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BAY44699
LinkDB
All DBs
Position
complement(2672732..2673631)
Genome browser
AA seq
299 aa
AA seq
DB search
MFEDKPKTSALPEIVVPDILPNQPILASQPQAWKGIIVEHHSQPPFEIPEHCLPQDLIAI
QTGPPIKVENVVNGRFQSGYSVSGDLSILPAHQLNWERWYGKAEYIAIRLEPELVVRATE
RSPEANRIEIIPHLRIRDPLLQQIGLALLREVKAEGTISRLYAESMATTLAVHLLKHYSA
SPPTIKNYTNNLPPSKLQEVIEYINEHLSQDLSLAELAAVVNLSPNYFVTLFKRSTGLSP
YQYVIHCRVERAKALLAENKLPIIEVCDRVGFQNPSHFTAVFRRFMGTTPKAYREETRN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagataagcctaaaacttctgctctcccagagatagtcgtaccagatatccta
cccaaccagcctattcttgcgagtcagccccaagcatggaagggcattatcgtagaacac
cattctcaaccgccgtttgaaattcctgagcattgcttgccacaagatctcattgccatt
caaactggacctcctattaaggtagaaaatgtggtgaatggacgcttccaaagcgggtat
tctgtgagtggcgacctaagtattctgcctgctcaccagctcaactgggagcgttggtat
ggaaaagccgaatatatagctatacgccttgagccagaattggttgtaagagccacagag
cgatcgcccgaagccaaccgcattgaaattattccacatctgagaatccgcgacccactc
ttgcaacagatagggttagcactgctcagagaagtcaaagccgagggaactataagtcgt
ctctacgctgaatcaatggcgactacgctagcggttcacctcctgaaacattattccgca
tctccaccaactattaaaaattacaccaataatctgccgccgtccaaattgcaagaagtc
atcgagtatatcaatgaacatttgtcgcaagatttgtccttggctgaactcgccgccgtt
gttaatttgagtccaaattactttgtcaccttgttcaaacgctcaactggtttgtctcct
tatcagtacgtgattcattgccgggttgaacgtgctaaggcactactagctgagaataag
ttacctattatcgaagtttgcgatcgcgtgggattccaaaatcctagtcacttcacagca
gtatttcggcggttcatgggaacaacgccaaaagcgtatcgagaagaaaccagaaattag
DBGET
integrated database retrieval system
