Scytonema sp. HK-05: SAMD_23740
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Entry
SAMD_23740 CDS
T09974
Name
(GenBank) peptidase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
scyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_23740
03070 Bacterial secretion system
SAMD_23740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_23740
02044 Secretion system [BR:
scyt02044
]
SAMD_23740
Transporters [BR:
scyt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMD_23740
Secretion system [BR:
scyt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMD_23740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C39
ABC_tran
ABC_membrane
cNMP_binding
Peptidase_C70
RsgA_GTPase
Peptidase_C39_2
DUF87
Guanylate_cyc_2
AAA_22
AAA_29
AAA_16
MMR_HSR1
MeaB
nSTAND1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAY44772
LinkDB
All DBs
Position
2771403..2774567
Genome browser
AA seq
1054 aa
AA seq
DB search
MNSFSSLTAQTEQNSTSQQQCPTASPSILNFLRLVVEDTTLVSDFSKVWVVREFQLGDDL
TTYNLDRKTQDTNNVLYLVCQGRVRLLGFDATVGKEVSTQLLLAQQTFGADHLFCNQPLP
YRAIAASAGCVAQVTIPNLVSWLERIPNLQKHLQQVVFERQALIFFKTCTELSWQKNYTL
RQFLPYLVQKKIDAGSSLTEVTPPKEGRFWLMSGKISTQEAEKPPVVGNSWGYPETQLPA
WSAETDLQVYQLSVEHWESATAIAPELSPTQCEEEDKGRLQNSKYVLRTRYANKILKSLP
TVPPGLNPELEGLKAAETIADIHFSQEGIPPHRSITRLWRRRPFIQQQSSSDCGAACLAM
ISRYWGKRFSLNTLRNLAQTNRLGASLSDLADAAQNLGYQALPVRASLNVLELQKRPWIA
HWQGIHYVVVWQVKGDRVLICDPAIGKRSLTRQEFEENWTQYGLCLSPTERFKAFKDEKI
SLLGFWQVFWQHRILLGQIILASVLLQVFGLATPIYAQVVLDQVMSQKSLATLNVLAVSF
LIFGIWRIALTAVRQYLLNYFSNRIDTTLMGSFISHTLRLPLQFFASRQVEDIITRVQEN
RKIQLFLTRQTVSTVLDGAIAVVYLGLMAYYNLQLTLLVLVLLVPIIVLTLGISPSLKTA
SRETYNKSAAQNSSLVEIVTGIATIKTAASEQGSRWHWEQRFTDMLEARFHSQKLAHKFQ
LAKSMINHFRNTAVLWYGTTLVIHQQMSVGQFVAFHMLIGSAINPVLALLGLWDEFQEML
ISMERLNDVLTAQPEENPQKPLLVLPPIRGDVCIENVTFRFSQDEQPNTLQNVSFKIKAG
QTIGIVGSSGSGKSTLVNLLAGLYRPNSGRILIDGHDIAHVSPQSLRSQLGVVPQECFLF
SGTLLENITLYSSEYTLEQVIAAAQLAEAHTFIQSLPLEYNTRVGKGGITLSSGQRQRIA
IARVLLKNPRILILDEATSSLDIESEPQFLENIARFSRVSVAAPSEARTTFIIAHRLSTV
RHADCILVLDQGSLVEHGTHQELMNIGGLYNHFI
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgaactccttttcgtcgttaacagctcaaaccgagcagaattccacaagtcaacagcag
tgtcccacagcaagccctagtatcctcaactttttgaggctagttgtcgaggatacgact
ctagtatcagattttagtaaagtttgggttgtgcgtgagtttcagctaggtgacgattta
actacctataatctcgatagaaaaacccaagacacgaacaatgttctttacttagtttgt
caaggtcgagtgcgactgcttgggtttgacgcaaccgttggaaaagaagtatcaactcag
ttgcttttagctcagcaaacttttggagcagaccatttattctgcaatcaacctttacca
tatcgggcaattgcagctagtgctggttgtgtggcgcaagttaccattcctaacctcgtg
tcttggctagagcgaatacctaatttgcaaaagcatttacagcaagtcgtttttgagcgt
caagcgttaattttctttaaaacttgcactgagttatcctggcaaaaaaattatactctg
cggcaattcctaccttatttagtacaaaaaaagatagatgctggctcatctttaaccgaa
gtgactccccctaaagaagggcgcttttggctgatgagtggaaaaatctctactcaagaa
gcagaaaagccaccagtggtaggaaatagctggggatatcctgagacgcagttaccagct
tggagcgctgaaacggacttgcaagtctaccagctaagcgtagaacattgggagtcagca
acggcgattgcccctgaattatctcctactcagtgcgaggaagaggacaagggacgtcta
caaaattcaaaatatgtcctgcggacacgctacgcgaacaaaattctaaaatctctaccc
acagtcccacctgggctcaacccagagttagagggtttaaaagctgctgaaaccatagca
gatattcacttttctcaagaaggaattcctccccaccgctcaataacgcggttatggcga
cgaagacccttcattcaacaacaaagttcatcagattgcggcgcggcgtgtttggcgatg
attagccgctactggggtaaacgttttagtctgaacacgttgcggaatttagctcagaca
aaccgtctaggtgcatcgctttcagacttagcagatgcagcccaaaatttgggatatcaa
gcgctaccagtgcgggcttctttgaatgtgttggagttgcaaaagcgtccctggattgct
cactggcaaggaattcactatgttgtcgtttggcaagtcaaaggcgatcgcgtgttgatt
tgtgacccagcaattgggaagcgatcgctcactcgccaagagtttgaagagaattggaca
caatatggtctttgcttatcccctaccgaacgcttcaaggcgttcaaagacgaaaaaatt
tcccttttgggtttttggcaggttttttggcaacaccgtattttactggggcaaatcatt
ctcgcctcagtgctgctgcaggtgtttgggttggcaacacctatatatgctcaggtggtt
ctcgaccaagtcatgtcacaaaaaagcctagccactctcaatgtccttgctgtcagcttc
ctgatctttggtatctggcgcattgccttaacagcagtacgtcaatacctactgaactac
ttttccaaccgcatcgacacaacattgatgggtagctttattagtcacaccctgcgatta
ccgttgcaattttttgcatcccgtcaggtagaggatattatcacccgcgttcaggaaaac
cgaaaaatccaactgtttcttacccgtcaaacggtcagtactgtgttggatggtgcgatc
gcagttgtctacctgggattgatggcttattacaacttgcaactcactctgttggtgttg
gtgttgcttgtaccaataatcgttttgactttggggataagtccatctctcaaaacagcg
tcgcgggaaacctataacaaatcagcagcacaaaactcctcattggttgaaatagttact
ggtattgccacaataaaaacagcagcatctgagcaaggatcgcgttggcattgggagcag
cgcttcacggatatgctggaagcgcggtttcactctcaaaaactggctcataagttccaa
cttgcaaagagcatgatcaatcactttaggaacacagcggtgttgtggtatggaacaacc
ttggtgattcaccaacagatgtcggttggtcaatttgtcgcttttcatatgctcatcggc
agtgcaatcaaccctgttctagcgttgctagggttgtgggatgagttccaagaaatgctc
atctctatggaacggctcaacgatgtcttaactgctcagccagaagaaaatcctcaaaaa
ccactactggtgctacccccaattcgcggtgatgtttgtattgaaaatgtcactttccgt
tttagtcaagatgaacaacccaacaccctgcaaaatgtttccttcaaaatcaaagcaggg
caaaccattggtattgtcggttccagcggttcagggaaaagcactctagtcaacttgctt
gctggtttatatcgtcccaacagcggacgtattttgattgatggacatgatattgctcat
gtttcacctcaatcattgcgaagtcagttgggggtggtaccacaagagtgttttttgttt
tccggaactcttttagaaaacatcacgctttatagctcagaatataccctagagcaggtt
atagccgctgcacaactagcagaagcgcacacctttatccaatcgctacctctggagtac
aatacccgagtcggaaaagggggaataacgctttcgagtggacagcgacaaagaatagca
attgctcgtgtccttctgaaaaacccacgaattttgattttggatgaagccacgagttca
ctagatatagaatctgagcctcaatttctagaaaacatagctcggtttagtcgcgtcagt
gttgctgctcctagtgaagctcgcactacctttatcattgcccatcgtctttctactgtt
cgccatgctgactgcattcttgttttagaccaaggtagtcttgttgagcatggtacccat
caagagttaatgaacattggcggtctttataaccacttcatctag
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