Scytonema sp. HK-05: SAMD_27490
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Entry
SAMD_27490 CDS
T09974
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyt03032
]
SAMD_27490 (gyrB)
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_27490 (gyrB)
Enzymes [BR:
scyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMD_27490 (gyrB)
DNA replication proteins [BR:
scyt03032
]
Prokaryotic type
DNA Topoisomerases
SAMD_27490 (gyrB)
DNA repair and recombination proteins [BR:
scyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMD_27490 (gyrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
BAY45147
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Position
complement(3198288..3200225)
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AA seq
645 aa
AA seq
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MTSSYSAAQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSIDEALAGYCTHVEV
DLNADGSVTVVDDGRGIPTDIHPQTGKSALETVLTVLHAGGKFGSGGYKVSGGLHGVGVS
VVNALSEWIEVTVWRDKKVHIQRYERGIPVTDLTAKPSKEDRTGTSVTFKPDSQIFTTVT
EFDYTTLASRLRELAYLNAGVRITFTDNRLELLKSDTPKVETYEYKGGIKEYITYMNSDK
QPLHEEVIFVHGERNNVQVEVALQWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRT
LNAIARKRNKIKDNEPNLSGEHVREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSL
VGEVLTEYLEFRPGVADSVLDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSS
RDPKESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALIT
ALGLGVKGEEFDASQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGHIYIACP
PLFKVERGRNYYYCYSDRELQQRLAEFPDNANYTIQRFKGLGEMMPEQLWTTTMNPETRT
FKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNLTDLDI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagttacagtgccgctcagattcaagttctggaaggtctggaacccgtccgc
aaaagaccgggaatgtacataggttccacaggtccgcgagggctccatcatttagtttac
gaggtggtggacaactcgatagatgaagctttagcgggttactgcacccatgtggaggtg
gatctcaacgctgatggttctgtaaccgttgtagatgatggtcggggtattcccacggat
attcatccgcaaacgggaaaatcagcattggaaactgtgttaaccgtactgcacgctggc
gggaaatttggtagcggtggctacaaagtttctggaggattgcacggtgttggtgtttcc
gtagtcaacgccctgtccgagtggatagaagtgacagtttggcgagataaaaaggttcat
atccagcgctacgaacggggtattcccgtcacagatctgacagcaaagccctctaaagaa
gaccgtactggaacttctgttaccttcaaaccagactcccaaatcttcacgaccgttaca
gaatttgattacactactttagcaagtcgcctacgcgaattagcatatttgaatgctggc
gtcagaattacttttactgataaccgtctggaactacttaaaagtgatacacccaaggta
gaaacctacgaatacaaaggtggtattaaagaatatattacctacatgaacagtgataag
cagccattgcatgaagaagttatttttgtgcatggagaacgcaacaatgttcaagtggaa
gttgcgttgcagtggtgtactgatgcttatacagacaatgtgttgggctttgccaataat
atccgtacggtggatggtggtacgcacttagaaggtttaaaggcggttctgactcgtacc
ttgaatgcgatcgcccgcaagcgcaacaaaatcaaagataatgaacccaacctcagcggc
gaacatgtccgcgaaggtttaacgggtgtgatttctgttaaagtgccagatccagagttt
gaagggcaaaccaaaaccaaactcggtaacacggaggtgcggggaattgtggattctctg
gtgggagaagttctcaccgagtacctggaatttcgccccggtgttgctgattccgtatta
gataaagccatccaagccttcaaagccgcagaagccgcccgtcatgcgcgggaattagta
cgccgcaaatcagtgctggaatcttcgccattacctggaaaattggcagattgcagttcc
agagatcctaaggagtccgaaatttacatcgtcgaaggggactcggctggtgggagtgca
aaacaaggacgcgatcgccgattccaggcaattctccccctacgcggtaaaatcctgaac
atcgagaaaactgacgacgccaaaatctataaaaatactgaaattcaggcgctcattaca
gcactcggtttaggagttaagggcgaggaattcgacgcatcgcaactgcgctatcaccgt
atagtgattatgactgacgctgacgtggatggagcgcacatccggactctgttgttaact
ttcttctatcggtatcaaagggcgctgattgagcaggggcatatctacattgcttgtcct
ccactgtttaaagtagagcggggacggaattattactattgctatagcgatcgcgaactg
caacagcgcctcgctgagtttcccgacaacgccaattacaccatccaacgattcaaaggt
ttgggtgaaatgatgccagaacaactctggacaaccacgatgaacccagaaactcgtacc
tttaagcaagtggaaattgaggacgccgccgaagctgatcgcattttcacgattttgatg
ggcgatcgcgttgcaccccggcgcgaattcattgaaacctatggttctaaactcaactta
actgatttggatatctaa
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