Scytonema sp. HK-05: SAMD_31040
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Entry
SAMD_31040 CDS
T09974
Name
(GenBank) methyl-accepting chemotaxis sensory transducer with phytochrome sensor
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMD_31040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scyt02035
]
SAMD_31040
Bacterial motility proteins [BR:
scyt02035
]
Pilus system
Positive phototactic motility proteins
SAMD_31040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
GAF
dCache_1
HAMP
GAF_2
GAF_3
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
BAY45500
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Position
3614594..3617407
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AA seq
937 aa
AA seq
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MFNKTDPAKSIDDQNDSSLSEFTNNNVVKLPDEASTGTVPNNQANRASTTLKRLKLSTKA
TLLAIALGTVPVLAIGILAYLVASNSLTNKVSQLQQAEAKGLADKVNRFMIERYNDIQLI
SSLPIITNSQSDAFSQKEKQALLNKFVDTYKVYDSIAVLNLNGDVVAQSQGDPISNQSSS
NYFQRVKQDDRPYISQPEVISNTGAYSINIAAPVKNTAGKTLAIVRARMPAKTLDQVVKN
YAESGHKYYLIDGSGKFFLATDRKHIGRNAKRDFPGLAQQQAQTKDDTFITVNQTEKQEQ
LVSYTSITPEGLPTLNWQSILATDTAIAFEPTRQLLLTVAVGAGLTGLIVALIAVWLAKR
TTEPIAKATAAVAKLGKGELDTRLEVHSEDEFGVLSANINQMASQLQTLVQQQELDTQRA
KVLADITLQTRRSLKVEDIYKTAVREVRQAMKTDRVVIYKFNLETLDGDVVAESVTAGLP
RMLGVQIDDPCFRERHVETYKDGRVRAISNIYQDPNLSNAACYIKMLEKFAVKANLVAPI
IIGGELVGLMIAHHCDSPRNWQQAEIDLFKQLAIQVGYALEQAQLLEEVEKARAIAEKVS
QDERQQKEALQMQLLELLSEVEGAAAGDLTVRAEVTAGEIGTVADFFNSIVESLRDIVTQ
VKETATSVNEAIGSNEGAIRELTESALAQAAEINNTLDAVDDMAQSIQQVAASAQQAASV
ANTAAQTAKKSGMAMDMTVQNILHLRETVGETAKKVKRLGESTQQISRVVALINQISMQT
NLLAINAGIEAARAGEEGQGFAVVAEEVGELAARSAAATKEIEQIVENIQRETTEVVQAM
ELGTTQVVEGTRIVEDAKQNLGQILEISRQIDLLVQSISIATASQAQTSQTVSSLMKDIA
ASSQRTSDSSKKVSKSLQQTVEISQQLQATVGTFKVN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaaactgatcctgctaaaagtattgatgatcaaaatgactcatctctatct
gaatttacaaataataatgtcgtaaaactgcctgacgaggcgagtactggcactgttcct
aataatcaggcaaatcgtgcatctacaactttgaagcgactaaagttaagtaccaaagct
acattactcgcgatcgctctggggacagtaccagttttggcaattggaatacttgcgtac
ttagttgctagtaattccttaaccaataaagtttcccaacttcaacaagccgaagccaaa
ggtctggcagacaaagtaaaccgtttcatgatagaacggtacaacgatattcaactcata
tctagtttaccaattatcacaaattcgcaaagtgatgctttttctcaaaaggaaaagcag
gcattgctcaataagtttgttgatacttataaagtatatgacagcattgcagtactcaac
ttaaacggcgatgtcgttgcccaatcccaaggagatccaatttctaatcaaagcagtagt
aattattttcaaagagtcaaacaggacgatcgcccttacatcagtcaaccagaagtaata
agtaatacaggggcttatagcattaatattgcagcgcctgtgaaaaataccgcaggaaag
acgcttgctatagtgagagctaggatgcccgcaaaaactctagaccaggtggtcaagaat
tatgcagaatcagggcataaatactatttgattgatgggtcgggaaaatttttcttagcg
acggacagaaaacatataggtagaaatgctaaacgagattttcctggtttagctcaacag
caagcacaaacaaaagacgatacttttattactgttaatcaaactgaaaaacaagagcaa
cttgtcagctacacatccataaccccagaaggattgccaactttgaactggcaatccatt
ctggctacagatacagcgatcgcatttgagcccacaagacaactgttgctaacagtagcg
gtaggggcaggattgacaggattaattgtggctttgattgcagtgtggttagccaaacgt
accacagaaccaattgcgaaagcgaccgcagcagtggcaaaacttggcaagggagaactc
gatacccgtttggaggtgcactcagaagacgaatttggcgttttgagtgccaacatcaac
caaatggcgtcgcaactccaaaccctcgttcaacaacaagaactagacacccaaagggca
aaggtactcgcagatattaccctgcaaactcgtagaagcctgaaagtcgaagacatttac
aaaactgctgtcagagaagttcgtcaggcgatgaaaacagacagggttgtcatttataaa
tttaatctagaaaccctagatggagatgtcgtcgctgaatcagttacggctgggctacca
aggatgttgggagtgcaaatcgacgatccctgttttcgagaacgccatgtagaaacttat
aaagatggtcgagtacgggcaatatccaatatctatcaagatcctaatctcagcaatgca
gcttgttacatcaaaatgttggagaaatttgctgttaaggcaaatttggtagcaccaatt
attatcggtggggagctggtgggcttgatgattgctcatcattgtgacagccctcggaat
tggcaacaagctgaaatagatttgtttaaacaactggcgattcaagtgggctatgcccta
gagcaagcacagcttcttgaggaggtcgaaaaagcaagggcgatcgccgaaaaagtttca
caagacgaacgccaacagaaagaagccctacaaatgcaacttttggaactcctttctgag
gtagaaggtgcagccgcgggtgacttaacagtacgtgcagaagtcacggcgggagaaatt
ggcacagtagccgactttttcaactcgattgttgaaagtttgcgcgatatcgtcactcaa
gttaaggaaaccgctacctctgtgaatgaggctataggctcgaacgaaggcgctatccgt
gaactcacagagtcagcactcgctcaagcagcagaaatcaacaacactcttgatgctgtt
gacgacatggctcaatcgatccaacaagtcgccgccagcgcccagcaagcagcctcagtt
gccaataccgccgcccaaactgccaaaaagagtggcatggcaatggatatgacggtgcaa
aacatcttgcatttgcgagaaacagtcggcgaaaccgccaagaaagtcaagcgtttagga
gaatcgacgcaacaaatttcgcgtgtggtggcattgattaatcagatttctatgcaaacc
aacttactcgccatcaacgctggtattgaagccgcacgtgcaggtgaggaaggtcaaggt
tttgcagtcgtcgctgaggaagttggggaactggcagcccgaagtgcggcggcgaccaaa
gaaattgaacaaattgtggaaaatatccaacgcgaaacaacagaagttgtgcaagcgatg
gaactaggaaccactcaggttgtcgaaggaacgcggattgttgaagatgccaagcaaaat
ctcgggcagatattagagatttcgcgccagattgacttgttggtgcagtcgatttcaatc
gccacagcatcgcaggctcaaacatcgcaaacagtcagttctttaatgaaagacattgct
gcttcctcgcagcgcacaagcgattcttccaagaaggtttccaagtctttgcaacaaact
gtggagatttcgcagcaattgcaagcgactgtcggtacattcaaggtgaattag
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