Scytonema sp. HK-05: SAMD_35060
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Entry
SAMD_35060 CDS
T09974
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_35060
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAMD_35060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF4143
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
BAY45899
LinkDB
All DBs
Position
4060835..4061767
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AA seq
310 aa
AA seq
DB search
MSNCQGLNQEKPLLVDFKEQGASLAIFPNPPLLTSLHTEWSGIHFEHHHQPSHDTPEHCL
TMHTISIALDVGSTERWFDGHRESEYQTKGTTAIIPAGTLHRCLWEQDVQFMFLAIDPKL
LIQLGVEVAAPEDIELIPHFATLQDPLILGILLSLKDELESTNQGDNLYVEQLKTTLVFH
LLKKYCAKKPQSSTYADGLGKYKLRQIIDYIHSHVDSEIKLTRLAEMAGISQYYFCQLFK
QSLGISPYQYVLQLRVERAKQLLKNQKMTICDVALACGFANQSHFTKHFRKLTGTTPKAY
WKNLSMVSAQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactgccagggattaaaccaggaaaagcctttgctcgttgatttcaaagagcaa
ggagcttctcttgcaatctttcctaacccacctctgttaaccagtttgcatacagaatgg
agcggtattcattttgaacatcatcatcagcctagtcatgataccccagagcattgcctg
acaatgcatactatcagtattgccttagacgttggttccacagaaagatggtttgacgga
catagagaaagcgaataccagacgaaaggaaccacagcgattattcctgctggaacgctc
caccgttgcttatgggaacaagacgttcaattcatgtttctggcaattgacccgaagctt
ttgatacagttgggtgtggaagtcgcagcacctgaggacattgaactgattcctcacttt
gccacattgcaagacccgctgattctgggtatattattatcccttaaagacgaactagag
tcaacaaatcaaggagataatttgtatgttgagcagttgaaaacgacgctagtttttcat
ttgttaaaaaaatattgtgctaaaaaacctcaaagctcaacgtatgctgatggattaggt
aagtataaattaagacaaataatcgattacattcacagccatgttgattcggaaataaaa
ttgaccagattagctgaaatggcgggaataagccaatactacttctgccaactcttcaaa
caatcattgggtataagcccttaccaatacgtacttcagttgcgggtagaacgggcaaag
cagttgctgaagaaccaaaagatgacgatttgtgatgttgctttggcgtgtggttttgcc
aaccaaagccacttcaccaagcactttcgcaagctgacagggacgacacccaaggcatat
tggaaaaatttatcaatggtaagcgcacagtaa
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