Scytonema sp. HK-05: SAMD_35990
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Entry
SAMD_35990 CDS
T09974
Name
(GenBank) signal transduction histidine hinase
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02020
Two-component system
scyt02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMD_35990
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SAMD_35990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scyt02022
]
SAMD_35990
02035 Bacterial motility proteins [BR:
scyt02035
]
SAMD_35990
Enzymes [BR:
scyt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
SAMD_35990
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
SAMD_35990
Two-component system [BR:
scyt02022
]
CheA family
CheA-CheYBV (chemotaxis)
SAMD_35990
Bacterial motility proteins [BR:
scyt02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
SAMD_35990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_10
HATPase_c
Response_reg
HisKA
CheR_N
PAS_4
PAS
PAS_8
Golgin_A5
PAS_9
DUF3540
HMMR_N
MIP-T3_C
zf-C4H2
HIP1_clath_bdg
STX6_10_61_N
FapA
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
BAY45992
LinkDB
All DBs
Position
4149532..4153764
Genome browser
AA seq
1410 aa
AA seq
DB search
MNDRESNEPKSTAKEEIVEEQETNKELFPIVGIGASAGGLAAFTELLRHLPTDTGMGFVL
IQHLAPEYKSLLSEILGRATQMPVIEVHDGMSVEPNHVYVIPPNTKMTITQGRLKLLPRE
KTRGMYMPVDVFFSSSAEERGSKAIGIVLSGSDGDGAQGLRAIKAAGGITFAQCEATAKF
TTMPNTAAATGHVDFILPPAAIAEKLAHISRHPYVTHPTPVETVEEPSLGENPLHNIFKL
LRTATGIDFTNYKHTTLKRRMMRRMALYRLEKLEDYVTYLQNNSAEVEALFQDLLIHVTS
FFRDSDVFQALKNQVFPSIMQNRAPEEPIRIWVAGCSTGEEVYSIAICLLEFLDDRQSLP
TIQIFGTDISNFAIEKARGATYIPSLVDEISPERLRRFFNKVEGGYQVSKFVRQMCVFAK
QNLIGDPPFSHLDLISCRNVLIYLGPALQKKVIPLFHYSLKPTGFLLLGTSESTGEYSDL
FTLVNKKQKIYSRKLTPTRLNFDFFTSNYSGQKMKDEARDSDALEGLDLHKEADRIVWNK
YAPPGVIINSDLEIVQFRGQTSPYLAPAPGKPSFNLLKMAQASLRLELRTAFLQAKRLDV
AVRKEGIQLTTKEQLRELNFEVIPFQVPPSQERYFLVLFEDVQASALPHSADDDPRIKPS
RGKQTATKQELIQLKQELAATKHELTATKEYLQSIIQDQEATNQELMTANEEILSSNEEL
QSTNEELETAKEEIQSTNEELSITNDELHSRIQELNKVNNDLRNLLSSVNIPIVMLANDL
TIRRFTPMAEKIFNLIPTDMGRPLNHIKPNINVPNLEQMILEVIDTLVIKEQEVQDTEGH
WYDLRIRPYKTLENQIDGAVLVLVDIDALKRSTEELKQSRDYAEAIVETIQQPLLVLDIN
LRVVTANQYFYETFLVSQAETEHHSIFELGNGQWNIPQLRSLLEEVLPQNNQIDNFEVEH
TFENIGRKTMLVNACKVLRANNHEMILLAISDITERQLFESQRNQLLINEQSARAAAEAA
NRTKDEFLSIVSHELRNPLSAILGWARLLRKHSFDAEQTANALEIIEASGKSLANLVEDI
LDISRITTGKLHINVSLIALAPVIEAAIDVARLSAEAKNIQIETVLESPPDTLWVSGDPE
RLQQVFWNLLSNSIKFTPVGGRVTVKLEHIGSFAQIQIIDTGEGISADFLPHVFERFRQA
DSTTTRSHGGLGLGLSIVSHLVEQHGGTIQAESPGEGQGTTMTVRLPLGIYHTQTSVSSN
LLQVSRAGQEVPLDTTPTLLGVRVLVVDDEAGLLELLRTILEEYGAQVMAVTSAKEAIAL
LRANPGEYDVLLSDIGMPDEDGYALLRQVRALDGELGRIPAIALSAYVRQEEQSQSLAAG
FQRHLAKPVEPARLASMIAELVQLNQMGNS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccgtgagtctaacgaacctaaatccactgctaaggaagaaatagttgaggag
caggaaacaaataaagaattatttcctatcgtcgggattggagcttctgctggtggattg
gcggcattcacggagttgctgaggcatctaccgactgataccggcatgggatttgtgctg
attcagcatttggctcccgaatacaagagcttgttgagcgagattcttggcagggcaacg
caaatgccagtcattgaagtgcacgatggtatgtccgtggaacctaaccacgtctacgtc
attccgccgaacacaaagatgaccattacccaaggcaggcttaaactcttgccccgtgag
aagacgcgtgggatgtatatgccagtcgatgttttctttagttcatcggcagaggagcgg
gggagcaaagcgattggaatcgttctgtcggggtcggatggagacggtgcacaaggacta
agggcaatcaaagcggctggcgggattacctttgctcagtgtgaagcaacggcaaaattc
actaccatgccgaatacggctgctgctacgggtcacgtggactttattctgcctcctgcg
gcgatcgccgagaaactggctcatatcagccgccatccctatgtcacccacccaacgcca
gtagaaacggttgaggaaccctcactcggcgagaatcctctgcataacatcttcaagttg
ctccggactgccacaggaattgattttaccaattacaagcacaccaccctcaagcggcga
atgatgcggcggatggctctgtacaggttggaaaaactcgaggattacgttacgtatctt
cagaacaactctgcggaagtggaagctttgttccaggatttattgatccatgtcacgagt
tttttccgagacagtgatgtatttcaagccttaaaaaatcaggtatttcccagcataatg
cagaatagagcgcccgaggagccaatccgcatctgggtggcggggtgttcaacaggtgag
gaagtttactcgattgccatctgcttattggagtttttggatgatcggcaaagtttgccc
acaatccagatttttggcacagatatcagtaattttgctattgagaaagcccgaggagct
acatacataccgagtttagtagatgagatttcaccagaacgtctacgacgcttttttaac
aaagtggagggcggataccaggtcagcaagtttgtccgccagatgtgtgtttttgccaag
caaaacctgatcggtgacccacctttttcgcatctggatctcattagttgtcggaacgta
ctgatttatttgggacccgctttgcagaagaaggtgataccgttgttccattacagcctc
aaaccaacaggctttcttctgctgggaacctcggagagtacgggcgagtactcagacttg
tttaccttagtaaacaaaaagcagaaaatttattcccgaaagttgacaccgactcggcta
aattttgacttctttaccagcaattattcaggacagaaaatgaaggatgaggctagggac
tcggatgctcttgaaggtcttgatttgcacaaagaagctgaccggattgtctggaataaa
tatgccccgcctggtgtgattatcaacagcgatctggaaattgtacaatttcggggacaa
accagtccctaccttgcaccagcacccggaaagccaagcttcaatttgctcaaaatggct
caagcaagcttgcggttagagctgcgcacagcgttcctccaggcgaaacgcttagatgtc
gcggtgagaaaggaaggcatccaactcacaactaaagagcaattgagagaactcaatttt
gaggttattcctttccaggttcccccttcacaagaacgctactttttagttttgtttgag
gacgttcaagcgtcagctcttcctcactcagctgatgacgaccctaggatcaagcctagt
agggggaagcagacagccacaaagcaggaacttatccagctaaaacaagaacttgctgcc
actaaacacgaactgactgcaactaaagagtatctgcaatcgattattcaggatcaggaa
gcaactaaccaggaactcatgaccgcgaatgaggagatcctgtcgagcaacgaagagtta
caaagcacaaatgaggaactagaaaccgccaaagaagagattcaatcgactaatgaagaa
ctgagcataactaacgacgaattgcacagtcggattcaagaattaaacaaggtcaacaac
gatctgcgcaatctacttagcagtgtcaatattcccattgtgatgttagcaaatgatcta
actatccgacgtttcaccccgatggcggagaaaatcttcaacctgatccccactgatatg
gggcgaccgcttaatcatatcaagcccaatattaacgttcctaacttagagcaaatgatc
ttagaggtgattgacaccttggtcattaaagaacaagaagttcaagacactgagggtcat
tggtatgacctacggatacgcccttacaaaaccctggaaaatcaaattgatggcgcggtg
ctcgtgttggtcgatattgacgccctcaaacgcagcaccgaggagcttaaacaatcccgt
gattacgccgaagcgatcgtcgagacaatacagcaacctctcttagtgcttgatatcaac
ttgagagtggtgacagcgaatcagtatttctatgagactttcctggtttcacaagccgaa
acagaacatcatagtatcttcgagcttggaaatggtcagtggaacattccccagctgcga
tcgctgcttgaagaagttctccctcaaaacaaccagatcgataattttgaggttgagcat
acatttgagaacatcggacgcaagacaatgctggttaatgcctgtaaagtcctgcgagca
aacaatcatgaaatgatactcctcgccataagtgacatcactgagcgtcagctgtttgag
tcacaacgtaaccagctactgattaatgagcagtcggctcgcgctgcagccgaggcagcc
aaccgtactaaagatgagttcttatcaatcgtctctcacgaactacggaaccctctgagc
gccatactaggctgggctaggctgctgcgtaagcactcttttgacgccgaacagactgct
aatgcactggagataattgaggctagtggcaagtcgctagctaacctggttgaagatatc
ctagacatatcacgcattaccacaggcaagctccacattaatgtcagtttgattgctctg
gcacctgtaattgaggcagccattgatgttgcacgtctatcagctgaggctaaaaacatt
caaatagaaaccgtgcttgaatcgccgcctgacaccctatgggtgtcaggcgatccggag
cgtttacagcaggtgttctggaatctgctttctaattccatcaagttcaccccagtcggg
ggacgagtgacagtcaaacttgagcatattggctcatttgcccaaattcaaatcattgac
acaggtgagggcatcagcgccgactttctaccccatgtctttgagcgcttccgtcaagca
gatagcaccaccactcggtcgcatggtggactcggactcggactctcaattgtgtctcat
ttggtagagcaacacggtggcacgattcaagcagaaagtccgggtgaggggcaagggaca
acaatgacagtgaggctaccattaggtatatatcacacacagacttctgtgtcaagtaat
ttgttgcaggtatcgagggcagggcaagaagtgccattagataccacgccaacgctctta
ggcgtgcgggtacttgtggttgatgacgaggcgggtctattagagttactgaggacaatt
cttgaagagtacggagcgcaagtgatggcggttacctcggcaaaagaggcgatcgccctt
ctaagagcgaatcctggtgagtacgatgttctgttgtcagacattgggatgccggatgaa
gacggctacgcgctgctccgtcaggtgagggcgcttgatggcgagttagggagaattccg
gcgatcgccttatcggcatatgtcaggcaagaagagcaaagccagtctcttgctgcaggt
tttcaaaggcatcttgctaaaccagttgaaccagctcgcttggcatcaatgattgcggaa
cttgttcagctaaatcagatgggaaactcttga
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integrated database retrieval system
