Scytonema sp. HK-05: SAMD_36530
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Entry
SAMD_36530 CDS
T09974
Name
(GenBank) ribulose bisphosphate carboxylase small chain
KO
K08698
carbon dioxide concentrating mechanism protein CcmM
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99981 Carbohydrate metabolism
SAMD_36530
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GFIT
Motif
Pfam:
RuBisCO_small
Hexapep
GSG-1
LbH_EIF2B
Hexapep_2
Glyco_hydro_67N
Motif
Other DBs
NCBI-ProteinID:
BAY46046
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Position
4212706..4214400
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AA seq
564 aa
AA seq
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MAVRSTAAPPTPWSRSLAEPKIHETAFIHPFSNVIGDVHIDANVIVAPGTSIRADEGTPF
HIGENTNLQDGVVIHGLEQGRVVGDDQNEYSVWIGSDASITHMALIHGPAYVGDSCFIGF
RSTVFNARVGAGCIVMMHALIQDVEIPAGKYVPSGAIITNQQQADRLPDVQAQDKQFAHH
VIGINQALRSGYICAGDSKCIKTIRDELAKSYTSNGNKFEFEELERSNDVASSSLGAETV
EQLRYLLEQGYKIGTEHVDQRRFRTGSWQSCTPIEARSVGEAIASLEGCLQEHSGEYVRL
FGIDKGRRRVLETIIQRPDGAVQAPTNFKAPTNQTNKSYNANGNAHSYSNGSGSSSGKLS
AETVDQVNQLLAGGYKIGMEHVDERRFRTGSWQSCTPIEATSIKQVVAALEDCIDSHQGE
YVRLIGIDPKAKRRVLESIIQRPNGSVSSSSSSSGSSKSVVASASGATSSAKASATSTRL
SSEVVEQLQQLINSGYKISVEHVDQRRFRIGSWASAGQIQANSVQQAAAALEGYLGEYQG
EYVRLIGIEPKAKRRVLETIIQRP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccgcagcacggcggcacccccaaccccgtggtcaaggagtttagctgagcca
aaaatccatgaaaccgcatttatacatcctttttccaacgttattggagatgtacatata
gatgcaaatgtaatcgttgctccggggacttcgattagagcggatgaaggcacacccttt
catataggtgaaaacaccaatttacaagatggtgtcgtcatacatgggctggagcaaggt
cgagtcgttggcgatgaccaaaatgaatactcggtatggattggcagcgatgcatccatt
acccacatggctctgattcatggaccagcttatgttggggatagttgcttcataggcttt
cgctccacggtgtttaacgctagggtgggagcaggttgcatcgtaatgatgcacgctctg
attcaagatgtggaaattccggcgggaaaatacgtaccttcaggagcaataattactaat
caacaacaagctgaccgtctgccagatgtgcaggcacaggataagcaatttgctcatcat
gtaattgggattaatcaagcgttgcgatctggttatatctgtgctggggatagtaagtgt
attaaaaccattcgggatgagttagctaaatcttatacaagcaacggtaataagtttgaa
tttgaagagttagaaaggagtaatgacgtggcgagcagtagcttgggtgctgaaacagta
gagcaattacggtatctgttggagcaagggtataagattggaacggaacacgtagaccaa
cggcggttccgcactggctcttggcaaagttgcacaccaatagaagctagatcggttggt
gaggcgatcgcatctttggaaggttgtcttcaggaacactcgggcgagtacgttcgtcta
tttggcattgacaaaggcagacggcgcgtcctagaaaccatcatccaacgtccagatggg
gcggtgcaagcaccaacaaacttcaaagctcctaccaaccaaacaaataaaagctacaac
gcgaatggtaacgctcatagttacagtaatggtagtggcagtagcagtggcaaactcagt
gctgaaactgtagaccaagtcaaccaactcctagcaggtggttacaaaattggcatggaa
cacgtagatgagcgtcgcttccgcacaggttcttggcaaagttgcacaccaatagaagca
acttccataaaacaagttgttgctgccttagaagattgtatagatagtcaccagggtgag
tacgtgcggttgattggtattgaccccaaggcaaaacggcgagtgttagaaagcattatc
caacgccctaacggttctgtcagttcatctagcagttcatctggcagttctaagtcagta
gtagctagtgcgtctggagcgacttcctctgcaaaggcatcagcgaccagtacccgccta
agttccgaggtagtagaacagctacagcaactcataaatagtgggtataaaattagtgta
gaacacgtagaccaacgacggttccgtataggctcctgggcgagcgctggacaaattcag
gctaattctgtacaacaagcagcagcagcattagaaggctaccttggtgaataccaaggg
gaatatgtgcggctgattggtatcgagcccaaagctaagcgccgcgtacttgaaacaatc
attcaacgtccgtga
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