Scytonema sp. HK-05: SAMD_36560
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Entry
SAMD_36560 CDS
T09974
Name
(GenBank) transcriptional regulator LysR family protein
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_36560
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMD_36560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BAY46049
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Position
4216361..4217299
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AA seq
312 aa
AA seq
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MNQATLHQLKVFEAAARHGSFTRAAEELFLTQPTVSMQIKQLTKSVGLPLFEQVGKRLYL
TEAGRELFATCRQIFETIAQFEMKVADLKGLKQGQLRLAVITTAKYFIPRLLGPFCQLYP
GIDIALQVTNHEGILERMSGNMDDLYIMSQVPEHLDVNCQPFLENPLVVLAPLNHPLAKE
KNIPIQRLADEPFIMREPGSGTRRAVQKLFDEHEVVVKVKLELGSNEAIKQAIAGGLGIS
VLSRHTLITDGQDVTILDVEHFPIPRNWYMVYPSGKQLSIVARTYFEYLLEAAKQFADKT
TSSSYFHIEENS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaagcgacgctgcaccagttgaaggtgtttgaggcggcggcacgtcacggtagc
tttactcgcgccgcagaggaactctttctcacccaacccactgtttcgatgcaaattaag
caactgacgaaatcagtcgggttgccattatttgagcaggtaggaaagcgtctctatctt
acggaagcgggacgggaactctttgccacttgtcggcagattttcgagacaattgcccaa
tttgaaatgaaggtggcagatttaaaagggttaaagcaagggcaattacgcttagcagta
attacgactgctaaatatttcattccacgtttattaggtccgttttgccaactttaccca
ggaattgatatcgcgctgcaagtgacaaatcatgaaggcattttggaacgcatgagcggc
aatatggatgacttgtatatcatgagtcaagtccccgaacatctagatgtcaattgccag
ccatttttagaaaatcccttggtcgttttggcaccgcttaatcatccgcttgcaaaggaa
aaaaatatccccattcaacgtcttgctgatgaaccttttattatgcgggaaccaggatca
ggaacgcggcgagccgtgcagaaattattcgatgagcatgaagtggtggtgaaggttaag
ctagaattagggagtaacgaggcgattaaacaagcaattgcgggtggtttaggaatttca
gttttatctcgacatacattaattaccgatggtcaggatgtaaccattttggatgtcgaa
cactttccaattccacgcaattggtacatggtatacccatcaggaaaacagctatctatt
gttgctcgtacctattttgaatatttactcgaagcagcaaagcaatttgcagataaaacc
acaagctctagttattttcatatagaggaaaatagttaa
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