Scytonema sp. HK-05: SAMD_37120
Help
Entry
SAMD_37120 CDS
T09974
Name
(GenBank) squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00100
Steroid biosynthesis
scyt00909
Sesquiterpenoid and triterpenoid biosynthesis
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
SAMD_37120
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
SAMD_37120
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scyt01006
]
SAMD_37120
Enzymes [BR:
scyt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
SAMD_37120
Prenyltransferases [BR:
scyt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
SAMD_37120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BAY46104
LinkDB
All DBs
Position
complement(4306751..4307569)
Genome browser
AA seq
272 aa
AA seq
DB search
MNLCKDALEILKETSRTFYIPISRLPKGLLEAVASAYLCMRAIDEIEDDPDLDNSTKAKL
LRTISVSLQAMGGAVTADELSLALSKHQTPLPEVSIRIGEWAMLAPETISPRIWDATAAM
ADRMAYWAECSWKINTEADLNCYTFSVAGSVGLLLSDLWAWYDGTQTNRVEAIGFGRGLQ
TVNILVNRGEDIQRGVNFFPDGWTQEDVKKYARYNLTLADAYTNALPKGPALDFCKIPLA
LAYATLDVLALGETKLTRNAVLSIVNQVASKN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttgtaaagatgctttagagattctcaaagaaaccagtcggactttttacatc
ccaattagtcgtttgccaaaaggacttctagaggctgttgcttcagcatacttatgtatg
cgtgcgattgatgaaattgaagacgatccagatctggataactctaccaaagcaaagctg
ttgcgaacaattagcgtcagtttacaggcaatgggtggcgctgttactgctgatgaactg
tctttggcattgagcaagcaccagacgccacttccagaagtatcgattcgtattggtgaa
tgggcaatgcttgcaccagaaactattagccctcggatttgggatgcaacggcagcaatg
gctgatagaatggcttactgggctgagtgcagttggaaaattaacacagaagccgatttg
aattgttatacgtttagcgtcgctggctctgtggggttgttactttctgacttatgggct
tggtatgatggtacacaaaccaaccgagttgaggctattggatttggtcggggcttacaa
acggtcaatattctggttaatcgtggtgaagatatacaacgtggggttaatttctttcct
gatggctggactcaagaggatgtaaagaaatatgcacgttataatctcactttagctgat
gcttatacaaatgctctcccgaaaggtcctgctttagacttttgtaaaattccgcttgct
ttggcttatgcaacacttgatgttctagctctgggagaaactaagcttacccgcaacgca
gttctaagtattgtaaatcaggttgctagtaagaactga
DBGET
integrated database retrieval system