Scytonema sp. HK-05: SAMD_37450
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Entry
SAMD_37450 CDS
T09974
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00540
Lipopolysaccharide biosynthesis
scyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMD_37450 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scyt01005
]
SAMD_37450 (lpxB)
Enzymes [BR:
scyt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
SAMD_37450 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
scyt01005
]
Lipid A
SAMD_37450 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
BAY46137
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Position
4341468..4342637
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AA seq
389 aa
AA seq
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MRIFISTGEVSGDLQGSLLVAALKRQAALAGLELEIVALGGEKMANVGATLLENTTRIGS
VGILESLPYVLPTLQIQRRAIAYLKQNPPDLVVLIDYMTPNIVIGNYLRRNLPQIPVVFY
IAPQEWVWSLNSRNTNLIVGITDKLLAVFPGEARYFQEKGANVTWVGHPLIDRVQSFPSR
ETARTQLAIAEDVISVALLPASRRQELKHLLPVMFQAAQVIQAKLPQVHFWIPLSLEIYR
EAIERAIQQYGLRGSVVSGKTQEVLAAADMAITKSGTVNLELALLNVPQVVLYRLHPITA
WIARTVLRGSIPFASPPNLVMMKPIVPELLQEQATPENITQAALELLLNSERKEQMLADY
QEMQQRLGEVGVCDRAAKEILQMLPNFQH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatatttatcagtactggcgaagtgtctggcgacctgcaaggatcgctgctagtt
gctgcacttaagcgtcaagcggcattggctgggttggaattagaaattgtggcgctgggt
ggcgaaaaaatggcaaatgttggagctacccttttagaaaatactactagaattggctca
gtgggtattctggaatcgctgccttacgtgttaccaacactccagatccagcgacgggcg
atcgcctatctcaagcaaaatccacctgacttggtggtgctcattgactacatgacacca
aatattgtcataggcaactatcttcgccgcaatctaccacaaataccagttgtattttat
atagcaccacaagagtgggtttggtcactgaattcacgtaataccaacttaattgttggc
ataacagacaagctgctagcagtctttccaggggaagcccggtatttccaagaaaaagga
gcaaatgtaacctgggtagggcatcctttaatagatagagttcaaagctttccgagtagg
gaaacggcgcgtacacagttagcaattgccgaggatgtcataagtgtcgctcttcttccc
gcctctcgtcgccaagaacttaaacatcttctgcctgtgatgttccaggcagctcaagtg
attcaagccaaattgcctcaggtacatttttggatacctttatctctggaaatctaccga
gaagcaattgaacgggcaatacagcagtacggtttacgaggttctgtggtatccggtaaa
actcaggaagtcctcgccgccgctgatatggcaatcaccaaatctggcacagttaacctg
gaactggcactgttgaacgtgcctcaagttgttctctaccgacttcatcccatcacggct
tggattgcccgtactgtgctgagaggttctatacctttcgcatcgccgcctaatttagtg
atgatgaagccgattgtgccagaattgttacaagagcaagcgacaccagagaacattacc
caagcggcactggaattattactcaattccgagcgtaaagagcaaatgttggcagactat
caagaaatgcagcagcgtttgggagaagtgggagtgtgcgatcgcgctgccaaagaaatt
ttgcaaatgctaccaaattttcaacattag
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