Scytonema sp. HK-05: SAMD_37630
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Entry
SAMD_37630 CDS
T09974
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyt03016
]
SAMD_37630 (ybbB)
Enzymes [BR:
scyt01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
SAMD_37630 (ybbB)
Transfer RNA biogenesis [BR:
scyt03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SAMD_37630 (ybbB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_33
AAA_18
DUF5884
CoaE
Motif
Other DBs
NCBI-ProteinID:
BAY46155
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All DBs
Position
4363730..4364800
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AA seq
356 aa
AA seq
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MPPLPRYTQQPWTETYSEIIDVRSSSEFAEDHIPGAINLPVLDDEERAQVGTIYKQVCPF
TARKIGAALVSKNISQHLTQHFAEKQKDYHPLLYCWRGGQRSNSMALVLTQIGWRVTLLE
GGYKTYRAYVRNQLEHLSEKFTYQILCGLTGSGKTHILHQMRQYGAQVLDLEALANHRGS
LLGEEWEGKPSPQPSQKYFESLLLQQLQSFNPAETVWLESESNKIGQVYLPPSLWEKMKQ
ASCVEIHLPITQRVQFLLQEYPHLTTHPDILKAKLEKLKSRYGKEKLSEWYQLIDAGKWE
FFVQDMLQFHYDPTYSKSMKRDFTKVERSLSIPDLSNTSLDTLLDSLLPNQVTANL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgccacctttacccagatacactcagcaaccttggacagaaacatacagtgaaataatt
gatgttcgttcaagcagcgaatttgcggaagatcacatccctggtgcgattaatttacca
gtgctagatgatgaagaacgcgcccaagtaggaacgatatacaaacaagtatgccccttc
accgcccggaaaatcggtgctgctttggtttcaaaaaacatctcccaacatctcactcaa
cattttgctgaaaaacaaaaggactaccatcctttgctttactgctggcggggtggacaa
cgttccaatagtatggctttggtgctgacgcagattggttggcgcgtgacgctacttgaa
ggcggctacaagacttatcgcgcgtatgtccgcaaccaattggaacatctgtcagaaaaa
ttcacttaccagatattatgcggtctcactggcagtggtaaaacccatattttgcaccaa
atgcgccagtatggtgctcaagttttagatttggaagctttagctaaccatcgcggttct
ttgcttggcgaagaatgggaaggaaaaccttcaccccaaccctctcaaaaatattttgaa
tcgctgttattgcaacaactgcaaagctttaatcctgctgaaactgtgtggttagaatca
gaaagcaacaaaattggacaagtttatttgccgccgtctttgtgggaaaaaatgaaacag
gctagctgtgtagaaattcacctacctattacccaaagagtccagtttctcttacaggaa
tacccacatttaacaactcatcccgatattttaaaagccaagctagagaaacttaaatcc
cgctatggaaaagaaaaattaagcgaatggtatcagttgattgatgctggaaaatgggaa
ttcttcgtacaagatatgttacagttccactacgatccaacgtatagtaaatccatgaaa
cgggactttaccaaagtagagcgatcgctatccatacctgatttatcgaataccagtctt
gatactttgttagattctcttttgccaaatcaggtgacagcaaatttgtaa
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