Scytonema sp. HK-05: SAMD_39160
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Entry
SAMD_39160 CDS
T09974
Name
(GenBank) ABC-2 type transporter
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_39160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_39160
Transporters [BR:
scyt02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
SAMD_39160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
Motif
Other DBs
NCBI-ProteinID:
BAY46308
LinkDB
All DBs
Position
complement(4521449..4522291)
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AA seq
280 aa
AA seq
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MSYQNTTVKQEFIIEAGRTEQQYWKDLWRYRELFYFLAWRDILVRYKQTAIGMAWALIRP
FLTMVVFSIVFGQLAKLPSQGVPYPILVFTAMLPWQFFANSLSECSNSLITNANLISKVY
FPRLIVPTSAVVVSFVDFLISGMILLGLMAWYNFVPTWRILTLPLFIGVAFAASIGVGLW
LASLNVQYRDFRYIVPFIVQFGLYISPVGFSSSVVPEKWRLLYSLNPIVGVIDGFRWAIL
GGDSYLYLPGFVLSLGLVALLFFSGIWYFRKMERKFADVI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaaaacactaccgtcaagcaagagttcatcattgaagccggacgcaccgaa
caacaatactggaaagacttatggcgctaccgggaattattctattttctggcgtggcga
gacattcttgtacgttacaagcagacggcaattggaatggcttgggcgctgattcgtccg
tttttgacaatggtggtgttctcaatcgtgtttgggcagttggcaaagttgccttcgcag
ggtgttccctacccaattttggtatttacagcaatgttaccctggcaattttttgctaat
tccctgtctgaatgtagtaatagtctgatcaccaatgccaacctgatttccaaagtctat
tttcctcgcttgattgtaccgacaagtgcagtcgtcgtcagctttgtagattttttgatt
tcagggatgattttactggggttgatggcgtggtacaactttgtccctacctggcgcatt
ttgacactgccattatttattggggttgcctttgctgcttcgataggagtaggactgtgg
ttggcttctttaaatgttcagtaccgggatttccgctacattgtgccgtttattgtacag
ttcggtctgtatatttcgccagtaggcttcagcagcagcgttgttccagaaaagtggcgc
ttgctttactccttaaacccgatagtaggggtgattgatggcttccgttgggcgatttta
ggaggagactcttatttgtatctaccaggcttcgttctgtctttaggactggtcgcctta
ctcttcttcagtggaatttggtatttccgcaagatggaacgcaagtttgctgatgtgatt
tag
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