Scytonema sp. HK-05: SAMD_39300
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Entry
SAMD_39300 CDS
T09974
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K06959
protein Tex
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SAMD_39300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
OB_RRP5_4th
SpoVAE
HHH_6
Motif
Other DBs
NCBI-ProteinID:
BAY46322
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Position
complement(4535544..4537703)
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AA seq
719 aa
AA seq
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MLNIPQLLATELNLKPYQVQNALELLAEGATIPFIARYRKERTGEMNEVQLREIEDRYNY
LKELEERKSVILNGIAEQGKLTDELKQKIESCLLKTELEDLYLPYRPKRRTRATTAREKG
LEPLAEFIKSLNVKNGASASLDAEAAKYISQEKGVKTAEEALKGASDILAEEVAEKAELR
AYLRDYLLEEGVFVSRIKNDHPEGTTKFEMYRNYQMRVRNIAPHNLLALCRGEAEEVLSF
EISFDEDVVLSYLESNEIKTKVRAIRDFYQAMLKDAFNRLMKVSIMTEVISQKKTQADIE
SIKTFEANLRELLLSAPAGMKPTLAIDPGFRTGCKVAVLDQTGKFLEYQAVFPHQAAEQR
QKAAQTVKNLIEKYKIELIAIGNGTASRETDEFVLQVLQTIERKPTKVMVNESGASIYSA
SKVALEEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNTASKELLTFVSGITSSVANNIVAYRNQHGAFKNRRELKKVAKLGPK
AFEQAAGFLRIRGSDNPLDNTAVHPESYQVVEAIASDLGVPLTQITQIGEKLKKTNLNKY
VTDTVGEPTLRDILSELEKPGRDPRAEFKYATFKEGIKEISDLKEGMELEGIVTNVANFG
AFVDIGVHQDGLVHISQLADRFVDDPKKIVKVGQVVKVRVLEVNEKLKRISLSMKSVKQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacattcctcaattactggctactgaactcaaccttaaaccttatcaggtgcaa
aacgcgctagaacttttggcggagggcgcgacaattccctttattgcacgatatcgcaaa
gagcgtacaggcgagatgaatgaagtccagttgcgcgaaattgaagataggtataattac
ttaaaggagttagaagaaaggaaatcggtgattttgaatggcatagcagaacaaggtaaa
ctcaccgatgaactcaaacaaaaaattgaatcgtgtttactaaaaaccgaacttgaggat
ttatatctcccctaccgtccgaaacgccgcacccgcgccaccactgctagagaaaaggga
ctcgaaccacttgcagagttcatcaagtcgttaaacgtcaaaaatggtgcttcggcgtcc
ttggatgcagaagcggcgaagtatatctcccaggaaaagggagtcaaaacagcagaagaa
gcgcttaaaggagcttctgatatcctagcggaagaagttgcggaaaaagcagaactgcgt
gcatatctgcgggattacttgctggaggaaggagtttttgtctcccgcatcaaaaatgat
catccggaagggacaaccaagtttgagatgtaccgcaattatcagatgcgggtgagaaac
attgcacctcacaatctgttggcgttgtgtcgcggtgaagcagaggaagtgttgagtttt
gaaatttccttcgatgaggatgtggtgctttcctacctggagtctaacgaaattaaaacg
aaagtccgcgccattcgtgatttttatcaagcgatgctgaaggatgcatttaaccgcttg
atgaaagtttctatcatgactgaagtgatttcacagaagaaaactcaagcagatattgag
tctatcaagacgtttgaagcgaatttgcgcgagttgctgctgtctgcaccagcagggatg
aaaccgacgctggctatagatccagggtttagaactgggtgcaaagttgctgtactcgat
caaacggggaaatttttggaatatcaggcggtatttccccatcaagcagctgaacaacgc
caaaaagctgcacaaactgtcaaaaatttaattgagaagtacaagattgagttaatcgcc
attggtaacggtacagcttcccgcgaaacagatgagtttgtcttacaagtgctgcaaaca
atcgaacgcaaaccgactaaagtcatggtgaatgagtcgggtgcttctatatattctgca
agcaaagttgccctagaagagtttcccgatttagatgttaccgtgcgcggtgctattagt
ataggtcgccgcttacaagatccacttgcggaacttgtaaaaattgatcccaagtctatt
ggcgtgggacaatatcagcacgatgtggatcagaagttgttgaaaaagaagttggatgaa
actgttgaaagctgtgtgaactacgttggcgtagacttgaataccgcttccaaggaactt
ctcacctttgtttctggtattacctcaagcgttgccaataacattgtcgcttatcgtaac
cagcacggcgcgtttaaaaatcgccgggaactgaagaaagtcgcgaaattgggaccaaaa
gcatttgaacaagcggcgggtttcttacgcattcgcggtagtgacaacccactggataat
actgcagtacacccagagagttatcaggtggtggaggcgatcgcatccgatttgggcgta
ccattaactcaaatcactcaaattggcgaaaagctgaaaaaaactaatctcaacaaatat
gtcaccgacaccgtaggcgaaccaacgctacgcgacatccttagcgaattagaaaagcca
ggaagagatccacgcgctgagtttaagtatgccacttttaaagagggaattaaggaaatc
tctgacctgaaagaagggatggaattagaaggtatcgttacgaatgttgccaactttggc
gctttcgttgatattggtgtgcatcaagatggtttggtgcatatctctcaacttgctgat
agatttgttgacgacccaaagaaaatcgtcaaggtgggacaagttgtgaaagtgcgagtg
ctggaagtcaatgagaaattgaagcggattagtttgtcgatgaaatcagttaagcagtag
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