Scytonema sp. HK-05: SAMD_39510
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Entry
SAMD_39510 CDS
T09974
Name
(GenBank) squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00906
Carotenoid biosynthesis
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
Module
scyt_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SAMD_39510
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scyt01006
]
SAMD_39510
Enzymes [BR:
scyt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
SAMD_39510
Prenyltransferases [BR:
scyt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
SAMD_39510
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GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BAY46343
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Position
4561208..4562140
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AA seq
310 aa
AA seq
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MLQLPDSPPCMKTLVSVDESYQLCRHLTAKYAKTFYLATLLMSKAKRQHIWAIYAWCRRT
DELVDGPVATMTTPETLDIWELQLESIFAGRPVDSFDVALVDTLHQNPMDIQPFRDMIDG
QRMDLYRSRYQTFNELYLYCYRVAGTVGLMSTAVMGVETSQNSTPWNQNKQPYIPTEEAI
ALGIASQLTNILRDVGEDARRGRIYIPQEDLARFNYTEQDLLKGVVDERWRALMRFQIAR
TRQFYAKAEKGISHLSADARLPVWAALMHYSRILKVIERNDYDVFNQRAYVPKLQKLGTL
PVAWLRAQVL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaactgcctgattctcccccatgcatgaaaacgttggtctctgtagacgagtca
tatcaactttgtcgccatctcacagcaaagtatgccaagactttttaccttgccacactg
ctgatgagcaaggcaaagcgccagcatatttgggcaatttatgcttggtgtcgccgtaca
gatgaactggtggatggtcctgtggctaccatgaccacaccagaaactctggatatatgg
gagctgcaactggaatccatttttgcgggacgcccagtagacagtttcgatgttgcattg
gtggataccctccaccaaaacccgatggatatccagccctttcgggatatgattgacggt
cagcgcatggatttataccgcagtcgctaccaaacctttaacgagttatacctctactgt
taccgcgtcgctggcactgtaggcttgatgtcaacagcagtcatgggggtagagacctcc
caaaactctactccctggaaccagaacaaacagccctacattcctacagaagaagcaatt
gctttaggaattgccagtcaactcaccaatatcctccgggatgtgggcgaggatgcaaga
cgggggcggatctacattcctcaagaagacttggcacggtttaactacactgagcaagac
ttgttaaaaggagtggtggatgagcgctggcgggcgctgatgcgcttccaaatagcacgc
acgcgccagttttacgccaaggctgaaaagggaataagtcacctgtctgccgatgcacga
ttgcctgtatgggcggctctaatgcattacagtcgaattcttaaagttattgaacgcaac
gattatgatgtgttcaatcagcgtgcctacgtgcccaaattgcaaaaattaggcactttg
ccagtagcatggttgcgggcacaagtgctataa
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