Scytonema sp. HK-05: SAMD_41610
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Entry
SAMD_41610 CDS
T09974
Name
(GenBank) permease YjgP/YjgQ
KO
K11720
lipopolysaccharide export system permease protein
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_41610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_41610
Transporters [BR:
scyt02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
SAMD_41610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motilin_ghrelin
Anthrone_oxy
Motif
Other DBs
NCBI-ProteinID:
BAY46549
LinkDB
All DBs
Position
complement(4818693..4819868)
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AA seq
391 aa
AA seq
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MAKYKSFYTLNSLLPFSIMDRYLTRELLPTFLFGVGAFASIGVTIDAMFELVRKIVESGL
PVGIAVQVFVLRLPEFIVLAFPMSTLLATLMTYSRLSSESELIALRGCGVSVYRMVLTAV
MLSLVVTGMTFVFNEHLAPASKYQASQILDKALKSEQPSIVKQQNIFYPEYQKVKQEDGK
GQKKILNRLFYADEFDGKQMKGLTIIDRSTEGLSQIIVSESGEWNPSQNLWDFYNGTIYL
VAPDRSYRNILRFEHQQVKLPRTALDLAQKSRDYGEMNIAQSLEQLEIERLGGDEPKIRK
LEVRIQQKIALPFVCVVFGLVGAAMGTIPQRTGRGTSFGISVIVIFTYYILYFITGALAQ
AGIFSTIVGAWLPNFLGLGIGTFLLMRVAQR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatacaagtctttctacacccttaattcgctgctgccattttcgatcatggat
cgctacttgacgagggaattgctgccaacatttttgtttggtgttggggctttcgcttcc
atcggcgtcacaatagatgcgatgttcgagttggtgcggaaaattgtcgaatccgggcta
ccggtagggattgccgttcaggtgtttgtgttaaggctgccagagtttatcgttttagcc
ttccccatgtctaccctgctggcgactttgatgacttacagtcgtctttcaagcgaaagc
gaactgatcgctctgcgcggctgtggggtaagtgtctatcggatggtgctaaccgctgtg
atgttgagtttggtagtcacaggaatgacctttgtgtttaacgagcatcttgcaccagcc
tcaaaatatcaagcatctcaaattttggacaaagctttaaagtcagagcagccaagtatt
gttaagcagcaaaatatattttatccagaataccaaaaggtcaagcaggaggatggtaag
ggtcagaaaaaaattctgaaccgcctgttttatgctgacgaatttgatggcaagcagatg
aaaggcttgacgattatagaccgttcaacagaaggtttaagtcaaattattgtatcagaa
tcaggcgagtggaatccatctcaaaacctctgggatttttacaacggtaccatctatttg
gtcgccccagaccgctcttatcgcaatatcctacggtttgaacaccaacaagtgaaattg
cctcgtacagcactagatttggcgcagaaaagccgagactatggtgaaatgaacattgcc
caatcgctggaacaattggagattgaacgcctcggcggtgatgagccaaaaattcgcaaa
ctcgaagtcaggattcaacaaaaaatagccttaccatttgtctgtgtcgtttttggcttg
gttggtgcagcaatgggaaccatacctcagcgcacaggtcgaggcacaagttttggtata
agtgtcatcgttatatttacgtactatatactttattttattaccggtgctttagcacag
gcgggtattttttctactattgtgggagcttggttgccgaacttcctagggttaggaata
ggtacattcttattgatgcgggtagcacaaagataa
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