KEGG   Scytonema sp. HK-05: SAMD_41900
Entry
SAMD_41900        CDS       T09974                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
scyt  Scytonema sp. HK-05
Pathway
scyt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scyt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SAMD_41900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scyt03021]
    SAMD_41900
   03400 DNA repair and recombination proteins [BR:scyt03400]
    SAMD_41900
Enzymes [BR:scyt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SAMD_41900
Transcription machinery [BR:scyt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SAMD_41900
DNA repair and recombination proteins [BR:scyt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SAMD_41900
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF1246
Other DBs
NCBI-ProteinID: BAY46578
LinkDB
Position
4847105..4847341
AA seq 78 aa
MLKRSKFETTQSQIMHRAEDLISAASNRYRITVQVANRAKRRRYEDFDNADDMMMKPVLR
AIIEMSDELTQPEIIGEV
NT seq 237 nt   +upstreamnt  +downstreamnt
atgctaaagcgttctaagttcgagacaactcaatctcagattatgcaccgggctgaggat
ctgattagtgcagcctcaaatcgctaccgcattacagttcaagtggcaaatcgcgctaag
cgtcggcgttatgaagactttgataatgcggatgatatgatgatgaagccagtgctaagg
gcaattatcgagatgtccgatgaactgactcaaccagaaattattggcgaagtctaa

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