Scytonema sp. HK-05: SAMD_42020
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Entry
SAMD_42020 CDS
T09974
Name
(GenBank) transposase, IS607 family protein
KO
K07496
putative transposase
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SAMD_42020
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
KCTD_C
Motif
Other DBs
NCBI-ProteinID:
BAY46589
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Position
4856534..4857733
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AA seq
399 aa
AA seq
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MYAIKVELKLNNKERILLRKHTGFSRFVYNYGLALMQGLEKDGIKGGCGKKIKAIKKVLT
NHTKKQPSYQWIGGLSSKVYQSSLQALENAIRRWYKGLGDKPRFKRRKDSESFSVYDGNG
KVLLKKGKQIKIPTLGTFRLKESLPCCYVTQTFTISHRAGKWFVSFAVDADKIPPTYQPE
EKVGIDLGVKCFATFSDGTSVESPKPMKKAKTKLAKLQWRNRKKQIGNRRKGIKQSNKAK
KYFDSLARKHWRVANQRQDFLHKLTTDISRKYYQIRIEDLNVSGMLANRKLSAAISDLGF
YEFRRQLIYKSQMYGTKVELVDRWYPSSKLCCMCGTKHDALKLSDRIYKCINSSCVAHTI
TLDRDINAALNLLNAPSGVCTVGSIGTNARGQVAADCLG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaattaaagttgaactaaaactcaataacaaagagcgtattttgttgcgtaaa
cataccgggttttcccgatttgtttacaactatgggcttgcgctcatgcaagggttagaa
aaagacgggataaaaggtgggtgtggcaagaaaatcaaagctatcaaaaaggttttgact
aaccacaccaaaaagcagccgagttaccaatggataggcgggctgtcttctaaggtgtat
caatcatctttgcaagccttagaaaacgctatacggcgctggtacaaaggcttgggtgat
aaaccaagatttaaacgtcgcaaagatagtgaatccttcagtgtctatgacggcaacggc
aaagtgttgctcaagaaaggcaagcaaataaagattcctacattgggaacttttcgtctt
aaagaatctttgccttgttgttacgtaacacagactttcaccatcagccatcgcgctggc
aagtggtttgtaagctttgctgtagacgccgataaaatcccaccgacgtatcagccagaa
gaaaaagttggaattgatttaggggttaagtgctttgccacttttagtgacggaactagt
gtggagtcgccaaagccgatgaaaaaagcgaaaaccaagctggctaaattacaatggcgc
aaccgcaaaaagcagataggtaaccgtcgtaagggcatcaagcaatcaaacaaagccaag
aagtattttgactcgttagctcgaaaacactggcgagtggcaaatcagcgtcaagacttc
ttgcacaagctaacaacagatataagtcgcaagtactatcaaatccggatagaggactta
aatgtttcaggaatgctagccaacagaaagttgtcagcagcgatttctgatttaggtttc
tatgagttccggcgtcagttaatctacaagtctcaaatgtatgggactaaggttgagttg
gttgataggtggtatccatcctcaaagctttgttgtatgtgtgggacaaagcatgatgca
ttgaagctgtcagacagaatctacaagtgcatcaactctagttgcgtagctcacacaata
accttggacagagatattaatgcggctttaaatttgttgaacgccccgtcaggagtatgt
acggttggctcaatcggaactaacgcccgtggacaagtagcagccgactgccttggttga
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