Scytonema sp. HK-05: SAMD_42870
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Entry
SAMD_42870 CDS
T09974
Name
(GenBank) transcriptional regulator NtcA
KO
K21561
CRP/FNR family transcriptional regulator, global nitrogen regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_42870
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SAMD_42870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
DUF3858
GntR
Motif
Other DBs
NCBI-ProteinID:
BAY46674
LinkDB
All DBs
Position
complement(4939588..4940259)
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AA seq
223 aa
AA seq
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MIVTQDKALANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEA
GEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTSVELLSAPIEQVEQALKENPELSM
LMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITVDLKLSHQAIA
EAIGSTRVTVTRLLGDLREKKMISIHKKKITVHKPVTLSRQFT
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgacacaagataaagccctagcaaatgtttttcgtcagatggcaaccggagcg
tttccgccggttgtggaaacatttgaacgtaataaaaccatctttttccccggcgatcct
gccgaacgagtgtattttctattaaaaggtgccgtaaaactctccagggtgtatgaagca
ggagaagaaataaccgtagcactgctgcgggaaaatagtgttttcggcgtcttatccttg
ctgacaggaaacaagtcagataggttttaccatgcggttgcttttacatctgtagaattg
ctgtcagcaccaattgaacaggtggaacaagcgctcaaggaaaacccagaattgtcaatg
ttaatgctgcgaggactatcttcgcggattttacagacagaaatgatgatagaaacactc
gctcacagagatatgggttctaggttggtgagttttttgttaattctttgtcgtgatttt
ggcgttccttgtgcagatggaatcacagttgatctgaagctatctcatcaagcgatcgct
gaagccattggttcaacccgcgttaccgtcactaggctactaggtgacttgcgcgagaaa
aagatgatttccatacacaagaaaaagattactgttcataagcctgttaccttaagtcgg
caattcacctaa
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