Scytonema sp. HK-05: SAMD_43470
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Entry
SAMD_43470 CDS
T09974
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
scyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_43470
03070 Bacterial secretion system
SAMD_43470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_43470
02044 Secretion system [BR:
scyt02044
]
SAMD_43470
Transporters [BR:
scyt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMD_43470
Secretion system [BR:
scyt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMD_43470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
Peptidase_C39
SMC_N
AAA_22
ABC_ATPase
AAA_25
AAA_16
AAA_29
SbcC_Walker_B
AAA_23
RsgA_GTPase
DUF87
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAY46734
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All DBs
Position
complement(5022536..5025517)
Genome browser
AA seq
993 aa
AA seq
DB search
MTYTASIQEFISELFPFNQLPTLELAKLIPKFEMLRYRMGQNILVRDQMPTQISIIYEGQ
ARLLSYDPNTQMPETLQLVKNGEILGWTSLLRGIPCETVIASTETVCLTLNATEFLALLR
NSPGVGICFENRCSAVEVFELLSAELGPRADSEAVLVSYGVTDIKELTLKVLDEAVVCTF
LEEMIPLEQLDPELVWFVSGGMLKDFPVGSRLELENVVTYLEVESFGYVRLVGLPRATLS
ASASATGDSSRINPLLEQIPYAPDHPRQPEKPSSSQSQPKYPHVHGRGPVKATLACFQML
SQHLNMPFRRDVIHQVLTNQVERTQTLSLQLCGAVAELIGLNTQFITVSARAITKLQAPA
MIRWQDTFAIIYEISEKKLVLGVPEVGIIQQEPDYFVENWGEEGQVLLLKVAKHTPKQRF
SLRWFLPSLLQYRKVLVEVLIASFFVQVFGLANPLVVQIIIDKVIIQNGFGTLNVLGILL
LIMAVFEGLLTSVRTYLFVDTTNRIDLTLGSEIIDRLFRLPLRYFERRPVGELATRANEL
ENIRSFMTGTALTVVLDAVFGAIYILVMVFYSWLLTLVALATVPVFAVMTMFFSSIVRRQ
LRTKAERYSQTQSYLVEALSGIQTVKAQNIELRSRWQWQQYYSNYVTAGFQTVVTSTAAS
VTSNFLNQVSSLFVLWVGAYLVLKGQLTLGQLIAFRIIAGYVTAPLLRLTQLWQNFQETA
LSLERLADILDTPSETDEEDRKNIPIPPIKGAVKYENVSFRFAPNGPLQLNNINVDFPAG
KFVGIVGQSGSGKSTLTKLLPRLYDLESGRILVDGYDIAKIELYSLRRQIGMVLQDSLLF
DGTIQENIALTNPDATTEEIIAAAKVAVAHDFIMSLPNGYNTRVGERGSALSGGQRQRIA
IARTVLQNPRLLILDEATSALDYQSERQACQNLARAFRGRTVFFITHRLSTVKNADIILL
LDQGLVVEQGTHDELMAQQGRYYCLYQQQESQL
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacttataccgcttctatacaagagttcatctctgaattattccccttcaatcaactg
ccaacattagaactggcaaaattaattccaaagtttgagatgttgcgttaccgcatgggt
caaaacattttggtgcgggaccaaatgcctactcaaatatcaatcatttatgaaggacag
gctcgcttgctgagttatgaccctaatactcagatgcccgaaacactccaattagttaaa
aacggagaaatcttgggttggactagtttgctaagggggattccatgcgaaacagtcata
gcctctacagaaactgtttgtctgactctaaacgccacagagtttttagcgttgctcaga
aattctcctggcgttggtatttgctttgagaatcgttgtagtgctgttgaagtttttgag
ctactgagtgctgaattaggaccgcgagccgatagtgaagctgtgctggtttcatatggt
gtaacggatatcaaagaattgactttgaaagttttagacgaagcagttgtctgcacgttc
ctagaggaaatgatacctttggagcagctagaccctgaactggtatggtttgtcagtggc
gggatgctaaaagattttcctgtgggaagtcgcttagaactagaaaatgtcgtaacctat
ctagaagtagagagttttggttatgttcgcttggtaggtttgcctcgggcaaccctttct
gcgtctgcgtctgcaaccggggattcctcaaggataaaccccttgctagaacaaatacct
tatgcacctgaccatcctcgccagccggaaaaaccgtccagtagtcaatcacagccaaaa
tatcctcatgttcatggcagaggtcctgtaaaggcgactttagcttgcttccaaatgctg
agccagcatttaaatatgccctttcgccgggatgtgattcatcaagtcctgaccaaccag
gttgagcgtactcaaaccctttcactacagctttgcggtgcggttgctgaactcatcggg
ttaaatactcaatttataactgtgtcagccagagcaatcacaaaactgcaagctcctgcg
atgattcgctggcaagatactttcgcaattatttatgaaattagcgaaaagaagctggtg
ctaggtgtaccagaagttggcattatccagcaagagcctgactattttgttgagaattgg
ggcgaagaaggtcaggtattgctgctcaaggttgccaaacatacccctaaacagcggttt
agcttacgttggtttctgccttcgctgctgcaataccgcaaagttctagtcgaagtcctg
attgcttccttttttgtccaagtctttggtctggctaatcccttagtcgtccagataatt
atcgacaaagtaattattcaaaacggctttggaaccctgaatgtgttgggtattttgcta
ttaatcatggctgtttttgaaggacttttaactagtgtccgcacttatttatttgtcgat
acgactaaccgaattgacctgactttaggctcagaaattattgaccgtctgttccgttta
cccttgcgctattttgaacgacgtcctgtaggggaattagcgactcgcgctaatgagctg
gaaaacattcgctcttttatgacaggaactgctttaacagtggtgttggacgcagttttt
ggtgcaatctacatcctggtgatggtgttctacagttggctgctgactcttgttgctttg
gcgactgtacccgtgtttgctgtgatgacgatgtttttttcctcgattgtgcgccgacag
ctgcgtaccaaagctgagcgttattcccaaacacaatcttatttagtagaagcgctgtca
ggaattcaaacagtgaaagcgcaaaatattgagttgcgatcgcgctggcagtggcaacaa
tactacagtaactatgtgactgctggttttcaaactgttgtcacttccactgctgctagt
gtcactagcaattttcttaaccaagtttcttccttgtttgtgttatgggtgggagcctac
ctagtactcaaaggacaactcaccttaggacaactcattgccttccgcattatcgctggc
tacgtcacggctcctttactacgattaacccaattgtggcaaaactttcaagaaacggct
ctctctctggaacgcctcgctgacatcttggatactccgtcggaaactgacgaagaagac
cgcaaaaatattccaatacccccgattaaaggcgctgttaagtatgaaaacgtctcgttt
cgcttcgcacccaatggtccacttcagttgaataatattaacgttgattttccagcagga
aaatttgtcggcattgtgggacaaagtggttctggtaaaagcacgttgacgaagctttta
ccgcgactatatgacttggagtctggcagaattctcgtcgatggctacgacatcgccaaa
atagaactctattcgctgcgccgtcagattggtatggtgcttcaagactcacttttgttt
gacggtactatacaggaaaatattgcgctgacaaatcccgatgcgacaactgaagaaatt
atcgcagcagccaaagttgctgtagctcatgactttattatgtctctgcccaatggttat
aacaccagagtcggggagagaggttcagctttatctggaggacagcgccaacgtatagcg
atcgctcgtacagttttgcaaaacccccgcttgctgattctcgatgaagcaaccagtgct
ttagattaccaatctgaacgccaagcttgccagaatttggcacgtgcctttcggggtaga
acagtattttttattacgcatcgtttaagtacagtgaagaatgctgatatcattctctta
ttagatcaagggttagttgtagaacagggaacccatgatgaactaatggcgcaacaagga
cgttactactgcctttatcaacaacaggaatcacaactctaa
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