Scytonema sp. HK-05: SAMD_43630
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Entry
SAMD_43630 CDS
T09974
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMD_43630
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scyt01007
]
SAMD_43630
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyt03016
]
SAMD_43630
Enzymes [BR:
scyt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SAMD_43630
Amino acid related enzymes [BR:
scyt01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SAMD_43630
Transfer RNA biogenesis [BR:
scyt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMD_43630
Prokaryotic type
SAMD_43630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
CAAD
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
ABC_tran_CTD
T2SSI
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
BAY46750
LinkDB
All DBs
Position
complement(5041980..5045021)
Genome browser
AA seq
1013 aa
AA seq
DB search
MTAINTNLPSLYEPFSTEAKWQTFWEENQIYKADANKGGESYCIVIPPPNVTGSLHMGHA
FDNTLIDTLVRYHRMKGYNALYLPGTDHASIAVQTVLEKQLKAEGKTRYDLGREKFLERA
WEWKAKSKGTIVGQLRRLGVSVDWTRERFTLDEGLTKAVLEAFFRLYEEGLIYRGKYLVN
WCPESQSAVSDLEVDSKEVDGNLWHFRYPLTDGSGFVEVATTRPETMLGDTAVAVNPNDE
RYKHLIGKTLTLPIMNREIPIIADELVDPTFGTGCVKVTPAHDLNDFEMGQRHNLPFINI
MNKDGTLNENAGSFQGQDRFDARKNVVSRLETDGFLVKVEDYKHTVPYSERGKVPVEPLL
STQWFVKIRPLADRALEFLDQKNSPQFVPQRWTKVYRDWLVKLKDWCISRQLWWGHQIPA
WYAVSETGGEIADNTPFVVAKSEAEAREKLKAQFGDNVKIEQDADVLDTWFSSGLWPFST
LGWPEQTQDLTTYYPTSTLVTGFDIIFFWVARMAMMAGHFTGQIPFKDVYIHGLVLDENG
KKMSKSAGNGVDPLLLIAKYGTDALRYTLIKEVAGAGQDIRLDYDRKKDESPSVEASRNF
ANKLWNAARFVMMNLDGQTPQQLGEPHPPTPSPLSREGGLELSDRWILSRYHQVVKQTNN
DIDKYGLGEAAKGLYDFIWGDFCDWYIELVKSRLQKDSEPTSRRVAQQTLAYVLEGILKL
LHPFMPHITEEIWHTLTQQGENSKQSLSLQPYPETQQNLIDSILEEQFELLFGTIRTIRN
LRAEADVKPGVKVTVNLQTGSDKEQQILTAGQPYIKDLAKVENLTIAAEQKKETFVGQKS
GFTWTKIVLVIGIIYLFKVGLAVADAVDDIPLIGTLFKVIGFGYSSWFVVQNLVFAEARQ
KFWKQLFPPTADENQLQAETQQPQEPEKAIADVVGTVQVVLPLAGVVDIDALRAKIEKRL
SKVEGEMKALSARLSNPNFVQQARPDVVEGARNALAEAEKQAEILRDRLLRLA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaataaacaccaacctccccagtctttacgaacccttctccactgaagccaag
tggcaaacattttgggaagaaaaccaaatttacaaagctgatgccaacaaaggcggcgaa
tcttactgcatcgttattccgccgcccaacgttaccggcagcttgcatatgggacacgcc
ttcgacaatacgctgattgacactctcgtgcgctaccaccggatgaagggatataacgcc
ctctatttacccggaactgaccacgccagcattgccgtacaaacggttctggaaaagcaa
ctcaaggcagaggggaaaactcgctatgatttgggacgcgagaaattcttagaacgcgct
tgggaatggaaggcaaaatctaagggaacgattgttggtcaattgcggcgcttgggtgta
tcggtagactggacacgggaacgctttaccttagatgagggtttaaccaaagctgttttg
gaagcgtttttccgcctctacgaagaagggctgatttatcgcggtaagtatctggtgaac
tggtgtccagagtcacaatcagcggtatccgatttggaagtggactcgaaagaggtagat
ggtaatctttggcacttccgctatcccctcacggatggttctggttttgtggaggtggcg
acaacccgacccgaaacaatgctgggcgatactgcggtggcggtgaatcctaatgatgag
cgctacaagcatctgatcggaaaaacactgactctgccaattatgaatcgggaaattccc
attattgctgatgagttggttgaccccacttttggaacgggttgcgtgaaggtgactccg
gcacatgacctgaatgattttgaaatgggtcagcggcacaatctgccgtttatcaatatt
atgaataaggacggcaccttgaacgaaaatgctggttccttccaaggacaagaccgtttt
gacgccagaaaaaatgtggtttctcgtctagagactgatgggtttctggtgaaggtggag
gattataagcatactgttccatacagtgaacgcggtaaagtccccgttgaacctctcctc
tcgactcagtggtttgttaaaattcgtccgttagcagatagggcgctagagttcctcgac
cagaaaaattctccacagtttgtcccccaacgctggacaaaggtctatcgtgactggttg
gtaaagctgaaagattggtgtatctctcgtcaactctggtggggacaccaaatccctgct
tggtacgctgtgagtgaaacagggggagaaatcgccgacaatacgccgtttgtggtggcg
aagtcggaagcagaagcacgggagaaattaaaagcacaatttggggataatgtcaagata
gaacaagacgcagatgtgctggatacctggttttcttccggactctggcccttttctact
ttgggttggcctgagcaaacccaagatttgacaacttactatcctaccagcactctggta
acaggctttgatatcatctttttctgggttgccagaatggcaatgatggcggggcatttt
acaggacagatacctttcaaagatgtttacattcacggcttggtgctggatgagaatggt
aagaagatgtccaagtctgctggtaatggcgttgacccgttgttactaattgccaaatat
ggtactgatgcgctgcgctacacgctgattaaggaagtggctggcgcgggtcaagacatc
cggttggattacgatcgcaagaaggatgaatcaccatcggtggaagcatctcgcaacttt
gctaataagttgtggaatgcggcgcggtttgtgatgatgaatttggacgggcaaacgccg
caacaactgggagaacctcaccccccaaccccctctccgctaagcagagagggggggtta
gagttaagcgatcgctggattctttcccgctaccaccaagttgttaaacaaaccaacaat
gacatcgacaaatacggactaggggaagcagcgaaggggctctacgactttatctggggt
gatttctgcgactggtacattgaacttgttaaatctcgcctgcaaaaagattctgaaccc
acgtctcgtcgcgtagcccaacaaaccctcgcttatgtgctggaaggaattttgaaatta
cttcatcctttcatgcctcatattaccgaggaaatttggcacactctcactcaacaaggg
gagaattctaagcaaagtttatctttacaaccttaccctgagactcagcaaaacttaatt
gactctattttggaggaacaatttgaactgctgtttgggacaattcgcacaattcgcaat
ttgcgagcagaagcggatgttaaacctggggtaaaagtcacggtgaatttgcaaaccgga
agcgataaagaacagcaaattctcactgctggacagccttatattaaagatttggcaaag
gttgagaatttaactatcgctgctgagcaaaagaaagaaacttttgttggtcaaaaatcc
ggattcacttggacaaagatagtattagtcattggcatcatttatttgtttaaagtgggt
ctagcggtagccgatgctgttgatgatattcccttaatcgggactttatttaaagtaatc
ggttttggttattcaagttggttcgttgtccaaaatttagtgtttgctgaagctagacaa
aagttctggaagcagttgtttccaccaacggctgatgaaaatcaactccaagcagaaaca
caacaaccacaagaaccagaaaaagcgatcgctgacgttgttggtacggtgcaagtggta
cttccccttgctggcgtggtggatattgatgcgttgcgtgccaaaatcgaaaaacgcctg
agcaaggtagaaggcgaaatgaaagctctaagcgctaggttaagtaatcctaattttgtg
cagcaagcacgaccagatgtggtagaaggagcgcggaatgccttagcagaggctgagaaa
caagcagaaattttgcgcgatcgcctgcttaggttagcatag
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