Scytonema sp. HK-05: SAMD_45420
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Entry
SAMD_45420 CDS
T09974
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_45420
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAMD_45420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BAY46926
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All DBs
Position
5256949..5257800
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AA seq
283 aa
AA seq
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MLMHVSTQPSSLHLKAEWDGITVEYGCLSAIGQFDFAMPKHAISVAFAPHDRVTWSVDGG
TTQTTALPAGSVFIYSSRDFVWHQRERESEYINMMLDPQVLNQVASENGLSTPVKIEHRV
IFPDPTILHVAQLLKSEVNSGGLAGKLYTESLRNLLAVHLLRNYTGAVEKPTLDDSPLDT
LKLNQVKDFIEQRLAEDLSIADMAAVVHMSQFHFARAFKTATGQSPHRYLTQRRMEQAKV
LLSVTRLSVAEVAYRVGFYNTSHFTAQFRKATSTTPKAYRDSD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgcatgtcagcacccaaccttcttcgttacacctaaaagccgaatgggacggc
attactgttgagtatggttgcttaagtgcgatcggtcaatttgattttgccatgcccaag
cacgccatcagcgttgcctttgcgcctcacgatcgcgtcacttggtcagttgatggaggt
acgacgcaaacaactgctttgccagcaggaagtgtgttcatatactcatcccgtgatttt
gtttggcatcagcgagagcgtgagagtgaatacattaacatgatgctcgatccccaagtt
ctcaaccaagtagcatcggaaaacggtttgtctactccggtaaaaatcgaacaccgcgtt
atttttccagatcctaccattctgcatgtagcgcaattgttgaagtcagaagtcaacagc
ggtgggttagctggaaaactctacaccgagtctctcaggaatttgttagctgttcatttg
ctgcgaaactatactggggcagtagaaaagcctacgttggatgactcaccactagatacc
ctcaaactaaatcaagttaaagattttattgaacaacgactggcagaagatttaagcatt
gctgacatggctgctgttgtgcatatgagtcagtttcacttcgcccgtgctttcaaaact
gccacaggtcaatctccccatcgctatctcacccaacggcggatggaacaagcaaaggtg
ctgctgtctgtgacacggctttctgttgctgaagtcgcttatcgagtaggtttttacaac
actagccatttcaccgcacagttccgcaaagcgactagcacaacaccaaaagcttaccgg
gacagtgattga
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