Scytonema sp. HK-05: SAMD_46160
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Entry
SAMD_46160 CDS
T09974
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMD_46160
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scyt01007
]
SAMD_46160
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyt03016
]
SAMD_46160
Enzymes [BR:
scyt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SAMD_46160
Amino acid related enzymes [BR:
scyt01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SAMD_46160
Transfer RNA biogenesis [BR:
scyt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMD_46160
Prokaryotic type
SAMD_46160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAY47000
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Position
5350156..5352594
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AA seq
812 aa
AA seq
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MRISLKWLQELVELKLSPEELAETLTLAGFEVEDIEDRRTWAAGVVVGKVLERQPHPNAD
KLSVCQVDIATGETLNIVCGASNVRADLYVPVATVGTYLPNIDLKIKPAKLRGVPSQGMI
CSLKELGLPSDVDGIHIFTQENLQVGSDVRPLLGLDDVILDVTATANRADALSMVGIARE
VAALTGAKLTLPKPGEQTPGTSRETFPLALKISDTQACPAYIGTVIDEVKIAPSPEWVQQ
RLRAAGVRPINNVVDITNYVLLEWGQPLHAFDRDRLQSVAGSDSLTIGVRFANAGETLKT
LDGQTRTLSTQNLLITANNKPVALAGVMGGEETEVHDGTQNLVLEAALFDSVAIRRSSRS
VGLRSEASGRYERGVNRAELEVATRRALSLISELAFGTIATQEIGDSRPDPSTWTHSIEL
RLDRVNQVLGPIDLGEQTGEIQGEDVERILTALGCQVTPIDDRTWTVSVPPYRYRDLERE
IDLIEEIARLYGYDKFYDTLPEKSEAGYLPLEQELIRKLRASLRAEGLTELIHYSLVKPG
EDRQIVLANPLFVEYSALRTDLISGLIDAFQYNLEQGNGSLNGFDIGRIFWHEEGLQEAE
AIAGIMGGDTSNSKWTRSDREQPMTWFEAKGILESVFQQLGLQVEYQSDRRDSRLHPGRT
ASLWVRGNSLGIFGQLHPQLRQEKGLPDSVYVFQLDLDVLLNYLDEDEILVPQFKPYSTY
PAADRDLAFFAPVKVTVAEIEKAITKAGKDLLESVELFDEYRGENVPQGQRSLAFRLIYR
ASDRTLTDNEVEPVHNKVREALVEKFGVSLRS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatctcactaaaatggttgcaagaactagtagagttgaaacttagcccagaagaa
ctagcagaaacactgacattagctgggtttgaggtggaagatattgaagatcgccgcact
tgggctgcgggcgttgttgtggggaaagtgcttgaacgccaaccccaccccaacgctgac
aagttgagtgtttgccaagtcgatatcgccacgggtgaaactttaaatattgtctgtggt
gcttccaatgtccgggcagatctctatgttccagtagcaaccgtaggtacttacttacca
aacattgatttaaaaatcaaacctgcgaaactacgaggtgttccgtctcaggggatgatt
tgttcgctgaaggaactgggtttacctagcgatgttgacggaattcatatttttacgcaa
gagaacttgcaagttggtagtgatgtccgtccactcttgggtttagatgatgtcatttta
gacgtgactgcgactgctaaccgtgctgacgctttgagtatggttggcatagcgcgggaa
gtcgcagccctgacaggggcaaagctgacgcttcccaaaccaggtgaacagacgcctggt
acgtctcgagaaacgtttcctttagctttaaaaatctctgatacgcaagcttgcccagca
tacattggcacagtaattgacgaagtaaaaattgcaccatcacctgagtgggtgcaacag
cgcctgcgtgctgctggagtgcgaccgataaataatgtcgtggatatcacgaactacgtt
ttgttggaatggggacagccgctgcacgcttttgaccgcgatcgcctacaatcggttgct
ggtagtgacagtctgacaatcggtgtccgcttcgccaatgctggggaaactctcaaaacc
ctcgatggacaaactcgcactctatctacccaaaatctcttaatcaccgccaataataaa
cctgtggcgctagcgggagtcatgggtggtgaagaaaccgaagtgcatgatggtactcaa
aacttggtattagaagctgcgctgtttgattctgtggcaattcgccgttcttcccgtagc
gtaggcttaagaagcgaggcgtctgggagatacgaacggggagtgaaccgcgctgagttg
gaagtcgccacacgccgcgctttatcactgatcagcgaactggcttttggaactatagcc
acacaggaaattggcgactcccgtcctgacccctcgacttggacacattcgattgaactg
cgtttagaccgagtgaatcaggttctcggaccaatcgatttgggagagcaaacaggagaa
atccaaggcgaagatgttgaacgcatcctgacagcactcggatgtcaggtgactcccata
gatgatcgtacgtggacggtttctgtacctccgtatcgttaccgcgacttagaacgggaa
atagacttaattgaagaaattgcccgtctctacggctacgataaattttacgatacccta
ccagaaaagtcagaagcaggttatttgccccttgagcaagaactgatacgcaagttacga
gcatcgctacgggcggaaggattgacagaattaatacactattccttggtaaaaccaggg
gaagacagacaaatcgtcctggcaaacccattgtttgtcgaatattctgcattgcgaacc
gatttgatatcagggttgattgatgcgtttcaatacaatttagaacaaggcaatggttcg
ctgaacggctttgacattgggcggattttctggcatgaagaaggtttgcaagaagcagaa
gccattgctgggattatgggaggcgatacttccaacagcaagtggacaagaagcgatcgc
gagcaacctatgacctggtttgaagccaaaggtattctagaaagtgtctttcaacaactt
ggcttgcaagtggaataccaaagcgatcgcagagattctcgcttgcacccaggacgtacc
gcttccctgtgggtacggggtaacagccttggtatctttgggcaactgcacccgcaactg
cgacaagaaaaaggcttaccagattcagtctacgtgttccagttggatctagatgtgctt
ttgaattatctggacgaagatgaaattttagtaccgcaattcaagccttactccacttat
ccagcggcagaccgagatcttgctttcttcgcacctgtgaaagtgaccgttgctgaaatt
gaaaaagcaattaccaaagcaggcaaagatttgctagagtctgtggaattgtttgatgaa
tatcgcggtgagaacgtgccccaaggacagcggagtttagcattccgtttgatttatcgg
gcaagcgatcgcaccctcaccgataacgaagttgaaccagtacacaacaaagtccgcgaa
gccctcgtggagaaatttggtgttagcctcaggagttaa
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