Scytonema sp. HK-05: SAMD_46200
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Entry
SAMD_46200 CDS
T09974
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SAMD_46200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyt03019
]
SAMD_46200
03009 Ribosome biogenesis [BR:
scyt03009
]
SAMD_46200
03036 Chromosome and associated proteins [BR:
scyt03036
]
SAMD_46200
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SAMD_46200
Messenger RNA biogenesis [BR:
scyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMD_46200
Ribosome biogenesis [BR:
scyt03009
]
Eukaryotic type
90S particles
RNase
SAMD_46200
Prokaryotic type
rRNA processing factors
SAMD_46200
Chromosome and associated proteins [BR:
scyt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SAMD_46200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEPN_Swt1
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DSRM_MRPL44
Motif
Other DBs
NCBI-ProteinID:
BAY47004
LinkDB
All DBs
Position
5355647..5356801
Genome browser
AA seq
384 aa
AA seq
DB search
MAVSNHERIGRGLTLLNQGLYPYVKREMQKVYGEGWLTIATSYMSNDETSKPEAEDILGD
NISVLLTLIIKQWDQVFSKKLGYTERALVAELIETSKTWTHQSRFLTEDTYRAIDTIARL
LKAISAPEVNVAQQQKQEVLAILSPKQAEKAPFAKEKLAEIIKQQGFQDSSLLRRALTHR
SYVHENPQEGEHNERLEFLGDALLTFLSGEYLYRRHPEKGEDELTRRRSALVDEKQLAKF
AIEVGLDFRMRLGKGATLEGGFQNPNLLSSTFEAVIAAYYLDNNYNIEAVRAVVEPLFDS
VPESIVQFRSNVDSKNRFQEWVQRNITQTPPKYVTVQAGGSSHAPEFIAKVFVGDKEYGQ
GKGRSKKDAEKAAAEDALARVRVL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctgttagcaaccatgaacgaattggcaggggtttaactcttttaaatcagggttta
tacccctatgtaaaaagggagatgcaaaaagtctatggtgagggttggctaacaatcgcc
acttcatatatgtctaatgacgaaacctccaagcctgaggcggaagacattctgggcgat
aatatttctgttttattaacactaatcattaagcaatgggatcaggtattcagcaaaaaa
ctaggttataccgaacgtgctttagtcgctgaactcattgaaaccagcaagacttggacg
catcaatctcgctttttaacagaggacacctatcgcgcgatcgacacgatcgctcgactt
ctcaaggctatctctgcaccagaggtaaatgttgcacagcagcaaaagcaagaagtttta
gcaattctcagccccaaacaagctgaaaaagccccgtttgcaaaggagaaattggctgaa
atcattaaacaacaaggctttcaggacagttctcttttacgccgtgcgctgacgcatcgt
tcctatgtccacgaaaacccccaagaaggagaacacaacgagcgcttagagtttcttggt
gatgctttactgacttttttaagtggcgaatacctctatcgtcgtcacccggaaaaagga
gaagatgaattaacccgtcggcgttctgcacttgtagatgaaaagcaactggcaaagttt
gcaattgaggttggcttagacttcaggatgcgcttgggtaaaggagcaactttagaagga
ggtttccaaaatcccaatttgctcagcagcacctttgaagcagtcattgccgcttactac
ctagacaacaattataatatcgaagcagttcgtgctgttgtcgaaccgctgtttgattct
gtacctgaaagtattgtgcagtttcgctcaaatgtagactccaaaaatcgttttcaggaa
tgggtacaacgcaacatcacccaaacaccccccaagtatgtcacagttcaagcaggtggt
tcttctcacgcgccggaattcatcgcgaaagtatttgtgggagacaaagagtatggacaa
ggcaaggggcgcagtaaaaaagatgctgaaaaagccgcggctgaagatgcgctggctaga
gtcagggttctctag
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