Scytonema sp. HK-05: SAMD_46750
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Entry
SAMD_46750 CDS
T09974
Name
(GenBank) squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00100
Steroid biosynthesis
scyt00909
Sesquiterpenoid and triterpenoid biosynthesis
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
SAMD_46750
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
SAMD_46750
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scyt01006
]
SAMD_46750
Enzymes [BR:
scyt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
SAMD_46750
Prenyltransferases [BR:
scyt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
SAMD_46750
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BAY47059
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Position
complement(5419591..5420412)
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AA seq
273 aa
AA seq
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MDLYGDALNILKETSRTFYIPIIQLPLGLQEAVASAYLCLRAIDEIEDHPDLDNFTKAKL
LHTISLTLQAGGDGFAIDAFYKGLKSHEHLLPEVSLRIREWAILAPATIAPRIWDATAAM
ADRMAYWAETSWKIRTESDLDRYTFGVAGAVGLMLSDLWAWYDGTQTNRLHAIGFGRGLQ
AVNIIRNHSEDLVRGVDFFPEGWSAKDLHHYARRNLALADAYTSALPAGPALDFCQIPLT
LAYGTLDAMANGKSKLSRSDVLALLDQLTNTSK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtatggagatgcattaaacatacttaaggaaacgagtcgaactttttacatc
ccaattattcagttaccacttggcttgcaagaggcggtagcgtcagcatacctgtgctta
cgagctattgacgaaattgaagaccatccagacctagataacttcaccaaggcaaagctg
ttacatacaattagcttgacattacaagcaggaggtgatggctttgccattgatgctttc
tacaagggcttaaaatcacatgaacatctactaccagaggtttccctgcggattcgagaa
tgggcaatacttgcgcctgcaacaattgcacctcggatttgggatgcgactgcagcaatg
gcagaccgaatggcttactgggcagaaacgagttggaaaatccgtacagagtctgactta
gaccgttacacatttggagtagctggtgctgttggcttaatgctctcagatttatgggct
tggtacgatgggacgcaaacgaaccgtctgcatgccattggctttggtcgcggtttacaa
gcggtgaatatcatccgcaaccacagtgaagacttggtgcgtggggtggacttcttcccc
gagggttggagtgcgaaagacctacatcattatgctcgtcgcaatttggcgctagcagat
gcctacaccagtgcccttcctgctggtcctgctttggacttttgtcaaattcccttgact
ttggcttatggcactcttgatgctatggctaatggcaaaagtaaactcagccgcagtgat
gtccttgcactgcttgaccagttgactaacacaagcaagtaa
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