Scytonema sp. HK-05: SAMD_51970
Help
Entry
SAMD_51970 CDS
T09974
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyt03016
]
SAMD_51970
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SAMD_51970
Transfer RNA biogenesis [BR:
scyt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SAMD_51970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Phage_SSB
DUF4407
Motif
Other DBs
NCBI-ProteinID:
BAY47579
LinkDB
All DBs
Position
complement(6039522..6040445)
Genome browser
AA seq
307 aa
AA seq
DB search
MPYLTLASEIRSVVAEYTKASILWIDTEIADYKSRNPRLSLIQVLDDPQDLSGDRIFVLD
VLNYPDVVAEFIDKIMVNANIEKVFHNASFDVKFLANKKAKNITCTLEMAKKIPYYALPL
PNYQLKTLAAELCHFKNIDKQEQGSDWGRRPLSEEQIEYAYLDCIYLAQVHQRLIELNQE
IHSEPATENLTSLNARYAQLEQQWKLLDSEFANLQERIKKAMLAQNVTESSYFKLSCYER
KTVKVPFTQLAKLVQTEDIDLDFPITLTQKLQKDLGENLEQLSVDIEQTTAWRLTPKNQE
SDENSDD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctaacattagcaagcgaaatccgttctgttgtcgctgaatataccaaagct
agcattttgtggattgatacagaaatcgcagactataaaagtcgcaatcctagactgtcg
ctgattcaggtattggacgatccacaagatttgagtggcgatcgcatctttgttttggat
gtactcaattaccctgatgttgtcgctgaatttattgacaaaattatggtcaatgccaat
attgaaaaagtctttcataatgctagctttgatgtcaaatttctggctaacaagaaagca
aaaaatatcacttgtactttagaaatggcaaaaaaaattccctactatgccttgccatta
cctaactaccaactcaaaactctagctgcagaactttgtcattttaagaatatagataaa
caagaacaaggtagtgattggggaaggcgacccctaagcgaagaacaaatcgagtatgct
tatctagactgcatttatcttgctcaagtccatcaacgtttgatagaattaaaccaagaa
attcactccgaacccgcaacggaaaacttaacatcactgaatgcaagatacgcacaactt
gagcaacagtggaaactcttagattcagaattcgcaaatctccaagagcgaataaaaaaa
gctatgcttgctcaaaatgtaacagaaagctcttatttcaagctaagttgttacgagcga
aaaacggtgaaagtaccgtttacacaacttgcaaaactagtacaaactgaagatatcgat
ttagattttccaatcacattgactcagaaactacaaaaagatttaggagaaaacctagaa
caactgtctgtagatattgagcaaacaactgcatggcgactgactcctaaaaatcaagaa
agtgacgaaaacagtgatgattga
DBGET
integrated database retrieval system
