Scytonema sp. HK-05: SAMD_52120
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Entry
SAMD_52120 CDS
T09974
Name
(GenBank) cell wall hydrolase/autolysin
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMD_52120
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scyt01011
]
SAMD_52120
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scyt03036
]
SAMD_52120
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
SAMD_52120
Peptidoglycan biosynthesis and degradation proteins [BR:
scyt01011
]
Peptidoglycan biosynthesis and degradation
Amidase
SAMD_52120
Chromosome and associated proteins [BR:
scyt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SAMD_52120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
SH3_3
Glucodextran_B
PCC_BT
SH3_4
DUF4443
Motif
Other DBs
NCBI-ProteinID:
BAY47594
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Position
complement(6057665..6059470)
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AA seq
601 aa
AA seq
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MRPLLGLVILSFIITPSLVLAQEQSLKVVYPRANSQTSAKKIFFIGTAPSSGEVLINGKP
VKRSKSGHFAPSFPLQVGENVFTVRYENQELLLKVTRVSTQPEVPQGLAFAKDSLTPAVD
IAKLPGEPICFKAIAPANAAVSVKLGNQTVSLARQPQQAQLPANSAALTGQNQPSAESSA
SNYQGCTTVETSANLGQPQFQLTLDGKTITQPGTGKITILSPAQLEVVEVTADSGVARTG
PTTNYSRLTPLPKGTRAAVTGREGEWLRLDYGAWINSKETRTLPGAIFPQTIIRSVGYRK
LPGVTEMVFPLQVPVPVSVQQNDQTFTLTLYNTTAQTDIIRLDDNALISRLDWQQLPPAT
AGGQGGVQYTFHLKKAQQWGYKLRYDGTSLILGLRDSPFNSSASKRETTGLFKRQKPLSG
LKILLDPGHGGKESGASGPTGYLEKDVNLVVSKLVRDELVRRGATVVMTRENDTEVSLPD
RVARIDKEEPAIAISIHYNSLPDEGDAENTKGMGAFWYHPQAHSLAVFMHNYIVSKLGRP
SYGVFWDNLALTRPASAPSVLLELGFMSNPNEFEWVTNPQEQKKLARVIADGIVEWFRSV
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccacttttaggattagtaatattaagctttataatcacaccctcgttagttttg
gctcaagagcaatccctcaaagttgtttatcctcgggcaaattcccagacaagtgcaaag
aaaattttctttattggcacagcaccatcaagtggagaggttctcatcaatggtaagcca
gtaaagcgcagcaagtctggtcattttgccccgagttttcccttgcaggtgggagaaaac
gtctttactgtccgctacgaaaatcaagaactccttcttaaggtgacaagagtttcgact
caaccggaagtaccacaggggttagcctttgccaaagattctctcacaccagcagtggac
attgctaaacttccgggggaaccgatctgttttaaggcgatcgccccagcgaatgcggct
gtttccgtaaagctgggaaatcagactgtttccctagcacgccagccacaacaagcacaa
cttccagcaaattctgccgctttaacagggcaaaatcaaccctctgctgagtctagcgca
agcaattatcaggggtgtacaacagtcgaaacatctgccaatttgggacaaccgcagttt
caactgacgctggatggcaaaacgataactcaaccaggaactggaaaaatcaccatcctc
tcacctgcacagttggaagttgtggaggtgacagcagattctggtgttgctcgtactggt
cccactacaaattattctagactcacgcctctacctaaaggcacacgggcagcagtcaca
ggacgagaaggtgagtggttgcgtttggactatggcgcttggatcaatagtaaggaaacg
cgcactttgccaggagcaattttcccacagactattatccgcagtgttggatatcggaaa
ctcccgggtgtgacggaaatggttttcccgctgcaagttcccgtccctgtgagtgtacag
cagaatgatcagacttttactctcaccctttataataccactgcccaaacagatattatt
cgcttagatgacaacgctctgatttctcgcctagattggcaacaactcccccccgctaca
gcagggggacagggaggagtgcaatacacttttcacctgaaaaaggctcaacagtggggg
tataagctgagatacgacggaacgagtctgattttgggtttacgtgactcacctttcaac
tcctctgcaagcaagcgggaaacaacggggttattcaaaagacaaaagccgttatctggt
ctcaaaattttactcgacccagggcatgggggtaaagaatctggtgcatccggaccaaca
ggatatttggaaaaagatgtcaacctggtggtttctaaattggtgcgcgatgagttggtg
aggcgaggggcgacggtggtgatgacacgggagaatgatacggaagtgtcgcttcctgat
cgtgtggcgagaattgataaagaagaaccagcgatcgccatttccatacattacaactcc
ctacccgatgaaggtgatgccgaaaacacgaaaggaatgggagccttttggtatcatccc
caagctcacagcttagcagtatttatgcacaactatatagtgagtaagttaggacgacca
tcctacggcgtattttgggataacttagcgcttacacgtccagcgagtgcgccatcagtt
ttgctggagttgggttttatgagcaatccaaatgaatttgagtgggtgacaaatcctcaa
gaacagaagaagctagcaagagtcatagctgatggaattgttgagtggttccgtagtgtc
cgctga
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