Scytonema sp. HK-05: SAMD_52310
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Entry
SAMD_52310 CDS
T09974
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyt03009
]
SAMD_52310
Enzymes [BR:
scyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SAMD_52310
Ribosome biogenesis [BR:
scyt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMD_52310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Phage_TAC_6
Motif
Other DBs
NCBI-ProteinID:
BAY47613
LinkDB
All DBs
Position
complement(6076390..6076989)
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AA seq
199 aa
AA seq
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MTIDYRYILFYKPYGVLSQFTKDSPTRSTLKEYIEVPDVYPVGRLDWDSEGLLLLTNHGQ
LQHRLSHPRFGHERTYWVQVERIPDAAALTQLQEGVMIQDYRTRPALVQLLPTPSLPERD
PPIRFRKNVPTAWLEMTLTEGKNRQVRRMTAAVGFPTLRLIRVAIAHLHLDGLQPGQWRD
LTPRELKLLLDLAFAGRGA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgactattgactatcgatatattctgttttataaaccttatggcgtcctaagccaattt
acaaaagactccccgacacgcagcaccttgaaagagtacatcgaggttcctgatgtgtat
cctgtggggcgtttagattgggacagtgaggggttactcctgttgactaaccacggacaa
ttgcaacatcgcctctcgcatcctcggtttggacacgaacgtacttactgggtgcaggtg
gaacgaattcctgatgctgcggctttgacacagctgcaagaaggtgtgatgatccaagat
taccggactcgaccagccttggtgcagctattaccaacaccttctttaccagaacgggat
ccgccgattagatttcgcaaaaatgtgccgacagcgtggttggaaatgactttaacagag
gggaaaaatcgtcaggtacggcgaatgacggcggctgtgggatttccgactttgcgcctc
attagggtagcgatcgctcacctacatttagatggtctgcaaccaggtcaatggcgtgat
ttgactcctcgtgaactcaaattgttacttgatttagcttttgcaggtcgaggcgcgtag
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