Scytonema sp. HK-05: SAMD_54190
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Entry
SAMD_54190 CDS
T09974
Name
(GenBank) MscS mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_54190
Transporters [BR:
scyt02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMD_54190
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Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st_1
DUF6541
Motif
Other DBs
NCBI-ProteinID:
BAY47800
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Position
6287891..6288901
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AA seq
336 aa
AA seq
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MNAEISAVWDKIQGMINGFIVLLPNIVLALIVFAIFFFVARTIKKVVKRLTRNRRQARNL
GMVLGRLAQGTTILVGLFVALSIVIPTFKAGDLIQLLGISGVAIGFAFRDILQNFLAGIL
ILLTEPFQIDDQIVFKNFEGTVENIETRATTIRTYDGRRIVIPNSELFTNSVTVNTAFDN
RRLEYDVGIGYGDDIDRAKQLIMEAMHSVNEVLKDPAPDVLVMDLAESTVNIRARWWINP
PRRADDLTSRDRVLSAIKKKLTENGIDLPFPTQQILFHDQTEETDGNRSRQREGWPSGKS
EVPKSRRISDSLRQLAELRAQGNDNAKVHSQSTGDN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagagatatccgcagtttgggacaaaattcaaggaatgattaacggattcatt
gtcctgttgcctaatatcgtactggcattaatcgtctttgccatcttctttttcgttgct
cggacaattaagaaagtcgtcaaacgcttgacccgtaaccgtcgtcaagcccggaatttg
ggaatggtactgggaaggttggcacaaggtacaacaattctggtgggtctatttgtggct
ctgtcaatagtaattcccacattcaaagcaggtgatttaatacaattattaggaattagc
ggtgtggcaattggttttgccttccgcgatattttgcaaaacttcttagctggcatttta
attctgctaactgaaccgtttcaaatcgatgaccaaattgtgtttaaaaactttgaggga
acagtcgaaaatatcgagacacgagccacaacaatcagaacttacgatggtcgtcggatt
gtaattcctaattctgagttattcactaattctgtgactgtaaatactgcctttgataat
cggcgattagagtacgatgtcggcattggctacggggatgatatcgacagagcaaagcag
ttaattatggaggcaatgcatagcgtaaatgaggttttgaaagaccccgctcccgatgta
ctggtgatggatttagctgaaagtactgttaatatccgcgcacgttggtggattaatccg
ccacgtcgtgcagacgatctgacctcacgcgatcgcgtgctatctgcaatcaagaaaaag
ctcacagaaaacggcattgatttacccttcccaacgcaacaaattttgtttcacgaccaa
acagaagagacagatggaaaccgatcacgtcagcgtgaaggttggccatctggtaaaagt
gaagtaccaaaatcgcgtcgcatcagcgattcgctccgacaacttgctgaattacgagcg
caaggaaacgataacgccaaggtacattctcaatctactggcgacaactga
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