Scytonema sp. HK-05: SAMD_57430
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Entry
SAMD_57430 CDS
T09974
Symbol
cpcF
Name
(GenBank) phycocyanobilin lyase beta subunit
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00196
Photosynthesis - antenna proteins
scyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SAMD_57430 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
scyt00194
]
SAMD_57430 (cpcF)
Enzymes [BR:
scyt01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
SAMD_57430 (cpcF)
Photosynthesis proteins [BR:
scyt00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
SAMD_57430 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
HEAT_EZ
TAF6_C
Cnd1
Motif
Other DBs
NCBI-ProteinID:
BAY48124
LinkDB
All DBs
Position
complement(6683617..6684264)
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AA seq
215 aa
AA seq
DB search
MTNTQQLIRAVTEADSPTKMVTAVQKLAAAKDTAAIPTLIAVFGYNNPPAAVAAVAGLTE
LGEVAVPQLLAQIDDYNYGARAYSIRALAAIADPRALDLLLAAATTDFAPSVRRAAAKGL
GNISWHQLDISERHTAQKRALSGLLAISQDSDWSIRYAAVVGLQALAKVPDLHDPIRARF
EEMLATDDEKAVRARVQLAQTEASNDVSLVRQSLP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgactaatacccaacaattaattcgcgccgttaccgaagcggactcacctacgaaaatg
gtgacggcagtacaaaaattggcagcagcgaaagatacagcggcaattcccaccttaatc
gccgtgtttggttataacaatccaccggcagcagtggcagcagttgctggactgacagag
ttgggagaagtcgcagtgccacagctgctagcacaaatagatgattataactatggcgca
cgggcatactcgatcagggcattagctgcgatcgctgatcctcgcgccttagatctattg
cttgcagccgccactactgactttgcccccagtgtccggcgtgctgctgccaagggattg
ggaaatatatcctggcatcaactggatatttcagaacgccacacagcccaaaaaagagcg
ctgtcaggcttgcttgccatttcccaagattccgactggtcgattcgttatgctgctgtt
gttggtttgcaagcgctagcgaaagtacctgatttgcacgatccaatccgggctagattt
gaggaaatgctggcaaccgatgatgaaaaagcagtccgcgctcgcgtgcaactagctcaa
acagaggcgagcaatgacgtttctctagtccggcaaagtttaccataa
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