Scytonema sp. HK-05: SAMD_57460
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Entry
SAMD_57460 CDS
T09974
Name
(GenBank) CpcD phycobilisome linker-like protein
KO
K02286
phycocyanin-associated rod linker protein
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00196
Photosynthesis - antenna proteins
scyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SAMD_57460
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
scyt00194
]
SAMD_57460
Photosynthesis proteins [BR:
scyt00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
SAMD_57460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
Motif
Other DBs
NCBI-ProteinID:
BAY48127
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Position
complement(6685596..6686456)
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AA seq
286 aa
AA seq
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MAITAAASRLGTEAFSDAPRVELRSNGSKEEIELVIRAVYRQVLGNDYVMASDRLVSAES
LLRDGNLTVREFVRAVAKSELYKKKFFYNSFQTRLIELNYKHLLGRAPYDESEVVYHLDL
YQNKGYDAEIDSYIDSEEYQNNFGDNIVPYYRGFETQPGQKTVGFNRIFRLYRGYANSDR
AQVEGTKPRLARELATNSASSIIGPSGNNENWSYRASSDVAPRKNLGNAVGVGDRVYRLE
VTGIRGPGYPSVRRSSTAFFVPYERLSDKLQQIQRQGGKIVSVTPA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcgattacagcagcagcctcgaggctgggaacagaggcttttagcgatgcacctcga
gttgaattgcgctctaacggcagcaaagaagagattgaattggtgatccgcgcggtttat
cggcaagtcttgggcaatgattatgtgatggcatcggatcgcctggtgagtgcagaatca
ctgctgcgggatggcaacttgacagtacgagagtttgtacgtgctgttgctaagtcagaa
ctctacaaaaagaagtttttctacaacagttttcaaactcgattaattgaactcaactac
aagcatttgttgggtcgtgctccttatgatgagtctgaggtggtttatcacttggacctg
taccaaaacaaaggatacgatgccgaaatagactcttatattgattctgaggagtaccag
aacaacttcggcgataacattgtgccttactatcgcggttttgagactcaacccggacaa
aaaaccgtgggatttaataggatattccggttatatcggggttatgccaatagcgatcgc
gctcaagtcgaaggcacaaaaccccgtctagcacgtgagttggcaacgaacagcgcctcc
tcgattatcggtccttctggtaacaacgaaaactggagctaccgcgcatcgagtgatgtt
gctcctcggaaaaatttggggaatgcagtcggagttggcgatcgcgtctatcggcttgaa
gtcacaggaattcgtggtcctggctaccccagcgtacgtcgtagcagcaccgctttcttt
gtgccttacgagcgactttctgataaactccagcaaattcagcgccaaggcggcaaaatt
gtcagcgtgacaccagcatag
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