Scytonema sp. HK-05: SAMD_59600
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Entry
SAMD_59600 CDS
T09974
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyt03000
]
SAMD_59600
Transcription factors [BR:
scyt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAMD_59600
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
BAY48339
LinkDB
All DBs
Position
complement(6923492..6924382)
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AA seq
296 aa
AA seq
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MPQDTVIDIQGSNGEAAPNRVTPILSSEKAGWNNILVEYWHMPAHELPPQLLPDYVINIH
FKGPARTEVVWDGRLLSKRFTHGEITILPPGLNCKGACLEDSDFLVLRLQPGIITQVAQE
LDYPDHIEIAPNLGVVSPQIQHIGLALKTELESGCLSGRIYGESLATALASYLLQQHSTS
KQRVQDFAGGLPKYKLCRTLEYINENLENELTVAELASVVEMSPYHFARLFKQSTGFTPH
QYLINSRIERAKMLLAEKKLSIAEICEYVGFRSPSHFIALFRKFTSMTPKAYRDQL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagacacagttatagacattcagggttctaacggtgaggctgctcccaataga
gttacaccgattctttccagtgagaaagctgggtggaacaacattcttgtcgagtactgg
catatgccggcacacgagttgcctccacaattgttaccagattatgtcattaacatacac
ttcaagggcccagctcggacagaggtggtgtgggatgggcgtcttcttagcaagcgcttt
acacacggtgaaataacaattcttcctcctggcttaaattgcaagggggcatgtttggag
gatagtgactttcttgtgctacgccttcaacctgggattatcactcaagttgcacaagag
ttggactatccagatcatattgagattgcacccaacttgggagtcgttagtccgcaaatc
cagcatattggtttggcacttaagacagaacttgagtctggatgcttgtctgggcgtatt
tatggagaatcactagcaacggcgctggcgagttatttgctacagcaacattctacctct
aagcaacgcgttcaagattttgctggtggtctacccaagtacaagttgtgtagaaccctg
gagtacattaatgaaaatctggagaacgagttaacagttgctgaacttgcaagcgtggtg
gaaatgagtccttatcactttgcccgcttgtttaagcagtcaacgggttttactcctcat
caatatctgatcaattccagaatcgagcgagcaaagatgctgttggcagagaaaaaattg
tcaattgccgagatttgtgaatatgttggctttcgcagcccaagccacttcatcgcattg
tttcgcaagttcacgtcaatgacaccaaaagcatatagagatcagctctag
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