Scytonema sp. HK-05: SAMD_61130
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Entry
SAMD_61130 CDS
T09974
Name
(GenBank) DNA photolyase, FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_61130
Enzymes [BR:
scyt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAMD_61130
DNA repair and recombination proteins [BR:
scyt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAMD_61130
Prokaryotic type
SAMD_61130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
NCA2
Glyco_hydro_7
Motif
Other DBs
NCBI-ProteinID:
BAY48488
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Position
7105541..7106989
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AA seq
482 aa
AA seq
DB search
MSDLILFWHRRDLRISDNTGLATARKQSPKVVGVFCLDPNILERDDVAPVRVTYMIGSLQ
SLQQRYAQAGSQLLILHANPTTAIPELAASLGARAVFWNWDVEPYSQERDRAVMEALQEK
GIQFLEKNWDQLLHSPEDIRTGSNQPYTVYTPFWKNWIGKPKANLVETLENAEGLTQAEK
EIAKASGAIELPSAKDLGFHWDGELVIAPGEAAAQERLEEFCASAINEYKEQRNFPAIDG
TSRLSAALKFGVIGVRTVWQATLEALEMSRSEETETSIRAWQQELAWREFYQHAMYHFPE
LAEGAFRDHFKNFPYDNNEEHFQAWCEGKTGYPIVDAAMHQMNELGWMHNRCRMIVANFL
TKDLLIDPRKGEKYFMQRLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQAQKFDFEG
EYIRQWVPELRSMDTEYLVTGKISPLERHAVGYPDPIVDHSIQQRQFKERYQRQKDGLGA
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttaattctgttttggcatcgccgcgatttacgcatttctgataacacagga
ctcgctactgcaagaaagcagagtccaaaggtcgtgggcgtgttttgccttgatccgaat
attctagaacgggatgatgttgctccggtcagagtgacttatatgattggtagtttacag
tcactacaacagcgatatgctcaagcaggtagccagttgttaattctccatgccaatcct
actacagccattccagaactggcagcgagtctgggcgcaagagctgtattttggaattgg
gatgtggaaccgtattctcaagaacgcgatcgcgctgttatggaagcgctacaagaaaaa
ggtatccagtttcttgagaagaactgggatcagctcttacactcaccagaggatattcgt
actggttccaatcagccctacaccgtctacacccccttttggaagaattggattggtaaa
ccgaaggctaacctagtagaaactctggaaaatgccgaaggattgacacaagccgaaaaa
gaaattgcaaaagcttctggggcaatagaattaccctcagccaaagatttaggtttccat
tgggatggagaattagtcattgcgccaggtgaggcggcggcgcaagaacggttagaggaa
ttttgtgccagtgcaattaatgaatacaaagaacagcgaaatttcccagcaattgacggt
acatccagattgagtgctgctttaaaatttggcgtgattggtgttcgcaccgtttggcaa
gcaactttggaagccctagaaatgagccgcagtgaggaaacagaaaccagcattcgtgca
tggcaacaggaactggcgtggcgggagttttatcaacacgcgatgtatcacttcccagaa
ctagcagagggtgctttccgcgaccatttcaaaaactttccttatgataataacgaagaa
catttccaagcttggtgcgaggggaaaactggctacccaattgttgatgcagcaatgcac
cagatgaatgaacttggctggatgcacaaccgctgtcggatgattgtcgccaattttcta
accaaagacttgctgattgatcccagaaagggagaaaaatacttcatgcagagattgatt
gacggtgatttatctgccaacaatggcggctggcaatggagtgcttctagcggtatggac
cccaaacccgtgcgaattttcaaccctgcaagtcaagcacaaaagtttgactttgagggc
gagtacattaggcaatgggttccggaattgcggtctatggatacggaatatttagtgacg
gggaaaatttcacccttagaacgtcatgctgttgggtatcctgaccccattgtggatcac
agtatacagcaacgacagtttaaagagcgttatcaacggcagaaagatggattaggggcg
ctgcggtga
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