Scytonema sp. HK-05: SAMD_63880
Help
Entry
SAMD_63880 CDS
T09974
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00061
Fatty acid biosynthesis
scyt00071
Fatty acid degradation
scyt01100
Metabolic pathways
scyt01212
Fatty acid metabolism
scyt02024
Quorum sensing
scyt04146
Peroxisome
Module
scyt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAMD_63880
00071 Fatty acid degradation
SAMD_63880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SAMD_63880
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMD_63880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scyt01004
]
SAMD_63880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyt04147
]
SAMD_63880
Enzymes [BR:
scyt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SAMD_63880
Lipid biosynthesis proteins [BR:
scyt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SAMD_63880
Exosome [BR:
scyt04147
]
Exosomal proteins
Exosomal proteins of breast milk
SAMD_63880
Exosomal proteins of breast cancer cells
SAMD_63880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAY48762
LinkDB
All DBs
Position
complement(7441960..7443498)
Genome browser
AA seq
512 aa
AA seq
DB search
MLAHLFKKAVKRFPKQTAIVYDQLQISYQELDSKVERLSAGLSSLGITQGNCIAVVLPNC
PEFVFSFYAIAQLNAIILPLNHLFKEEELSYCIEDSQAKAIITDYKRLEICTRAIAKLNR
EIEIIVVDRVASQTHFFYDLVTKVSTSATSQSDTVFGGNFLYQYSSGSTGKPKRVCRTQD
NLYHEAKNFAQTTQITPNDKILCAVPLYHSHGLGNCLLAATCNGATLVILEPVLQKDGTP
VEVPFVFRRPRILSLIKTEKITIFPGVPYIFNTMAETPADQSVDLSSLRLCFSAGNFLSE
EIFDKFLARFNLPIRQLYGCTEAGAIAINSEIYPVPTRTSVGFPLKNVEIKIIDEAENEL
PDGMIGEIVIKSLSLTSGYANQPELNQQAFKNSYFLTGDIGKKDHTGRLYVTGRKKLLID
TGGRKVDSLEIEEILMKHPKIQEAVVVGVKGEYAGELIKAVLVKKPQEPCEYSEIISFCK
TQMAEFKIPKIIEFRPEIPKSPLGKILRKELV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttagctcacctgtttaaaaaagcggtaaaaagatttcccaaacaaacggctatcgtt
tatgaccaattacagattagttaccaagaacttgactcgaaggttgagagattgagtgca
ggattaagcagtttaggaataacgcaaggaaactgtatcgccgtcgttttgccaaactgt
cctgaatttgtctttagtttttatgcgatcgctcagttaaatgctattattcttccctta
aatcatctgtttaaagaggaggaattaagctactgtatcgaggatagtcaggcaaaagca
atcattaccgactataagcgactagaaatttgtactagagcgatcgccaagcttaatcga
gagattgaaataattgtcgttgatcgcgtggcttctcagacacacttcttttacgactta
gtaaccaaagtatcaacaagcgccacgagtcaatcagatacagtctttgggggaaatttc
ctttatcaatattcatctggttcgacgggaaaaccgaagcgagtttgtcgcacccaagac
aacttatatcatgaggcgaaaaactttgctcaaacaactcaaattactccaaacgataaa
attttgtgcgctgttcctctgtatcactcacatgggttaggtaattgtttattagccgcc
acctgtaatggtgcaaccctcgttattctcgaacccgttttgcaaaaagatggcacacct
gttgaggttccctttgtcttccgtcgtccgaggattttgtcactgattaaaactgaaaaa
atcaccatttttccaggcgttccttatatctttaacacaatggcggaaactcctgctgac
caaagcgttgatctatctagtttgagattgtgcttttcagcaggaaacttcttatccgag
gagatttttgacaaatttttagcccgctttaacttgccaattcgacagctttatggttgt
acagaagcgggggctattgcgattaattcagaaatatatcccgtaccaactcggacttct
gtcggtttccctttaaagaatgtcgaaatcaaaattatcgatgaagcagagaatgaacta
cccgacggcatgattggggaaattgtgatcaaaagtctctctctaaccagtggttatgca
aatcagcctgaattgaatcaacaagcttttaaaaatagttatttcttaacaggagatata
ggaaaaaaagaccacactggacggctttatgttactgggagaaaaaaactcttgattgat
acaggtggtcgcaaagttgattccctcgaaattgaggaaattctcatgaagcaccccaaa
attcaagaagcggttgtggtgggagtcaaaggcgagtatgccggagaactgatcaaagcc
gttctagtcaagaagccacaagaaccctgtgaatattcagaaattatttctttctgtaaa
acgcagatggcagaatttaaaattcccaaaatcatcgaatttcgtccagaaattcctaaa
agtcctttagggaaaattctgagaaaagaattagtttag
DBGET
integrated database retrieval system
