Scytonema sp. HK-05: SAMD_65180
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Entry
SAMD_65180 CDS
T09974
Name
(GenBank) DNA photolyase, FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_65180
Enzymes [BR:
scyt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAMD_65180
DNA repair and recombination proteins [BR:
scyt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAMD_65180
Prokaryotic type
SAMD_65180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF6558
Motif
Other DBs
NCBI-ProteinID:
BAY48889
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Position
7593421..7594980
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AA seq
519 aa
AA seq
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MHILWFRRDLRLNDNESVISAVNNDAPVLPCFIIDPWFYDQLEVGKARVTFLFESLENLD
RNLRSRGSQLYLFEGKSVDILQQLTQQLMEIGHKPKLYFNRDVQVEYGITRDRAIINFYH
QLNLEYHIGLNNFLQTDDDHRDQWFDEYYTYVRQAPHLTPIRILTPQLSLNLPQLTFTEV
KQKYSTFYETKRVYFKGGETQAQATLNSFLTKRFHGYHWKLSRPWLAQQKATSHLSPHLA
FGTISVRTIYQRTKARAAELSHQPKAEFSLKAFRDRLRWHDSFTQRLYFHPEIAHTNRYS
EFDEYYRPDELTQQQQELFHAWCEGITGFPMVDASMRQLKTMGWMNFRMRAMCATFLTIN
CGISWHHGARHYMNYLVDGDLAINNWQWQMQAGITNPLSDTFRIYNPNKNLEEKDSDLRF
IYHWIPELLGYSLFEIIQGKYIELGSYQKPILDWSMTRKVNGKIVSDIRSRVRERLLANG
GDEYEAAIATKTTVEKYFESKVDTLRPKGSEILGSTTHH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcacattctctggtttcggcgagacttgcggttgaacgacaatgaaagtgtaattagc
gcagtgaataacgatgctcctgtcttaccctgcttcatcattgacccttggttttacgac
caactagaggtaggtaaagcacgagtgacgtttctgtttgagtctctggaaaatctggac
cgcaacttacgttcaagaggaagtcaactctatttatttgagggaaaatctgtagatatt
ttacaacaacttacgcaacagttaatggaaattgggcacaaacccaagctctactttaat
cgtgacgtgcaagttgagtatggaataacccgcgatcgcgctatcatcaacttttaccac
caactcaatcttgagtatcacatcggtctcaacaacttcttgcaaacagatgacgaccat
cgcgatcaatggtttgatgagtattatacatatgttagacaagcgcctcacctaacgcca
attcgcattttaaccccacagctatccctcaatctaccccaacttaccttcactgaagtc
aaacagaagtacagtactttctacgaaacaaagcgagtttacttcaaaggtggagaaacg
caagcgcaagcgacactgaactcatttcttaccaaaagatttcatgggtatcattggaaa
ctatcacgcccctggttagcacaacaaaaagcaacgtctcatctatcacctcaccttgcc
tttggtacaatctcagttcgcacaatctaccaacgcaccaaagcacgagcggcagaacta
tctcaccaaccaaaggcagagttttctcttaaggcgtttcgagaccgattgcgttggcac
gatagttttactcagcgtttgtattttcatccggaaattgctcatactaatcgttactca
gagtttgacgagtactaccgaccagatgaattgactcagcagcaacaagagttatttcat
gcctggtgtgaaggtataactggtttcccaatggttgatgcaagtatgagacaactcaaa
acgatgggttggatgaacttcagaatgcgggcaatgtgtgccactttcttgactatcaat
tgcggtatctcttggcatcatggtgctagacactatatgaattatttggtagatggggac
ttggctattaacaattggcaatggcaaatgcaggctggcattactaatcccctcagtgac
acttttcgcatttacaatcccaataagaatcttgaggagaaagactcagatttacgcttt
atttaccattggataccagagttgctgggttatagtttatttgagattattcaaggcaag
tacattgaactaggttcatatcaaaagcctattttagattggtcaatgacccgtaaggtc
aatggtaaaattgtctccgatatccgctctcgcgtacgggaacggttgctggctaatggt
ggtgatgagtatgaagcggcgatcgctacaaaaacaactgttgagaaatactttgagtcc
aaagttgacactctccgccctaaagggtcggagattcttggctcaacgactcaccactag
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