Scytonema sp. HK-05: SAMD_69000
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Entry
SAMD_69000 CDS
T09974
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00630
Glyoxylate and dicarboxylate metabolism
scyt00710
Carbon fixation by Calvin cycle
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
scyt01120
Microbial metabolism in diverse environments
scyt01200
Carbon metabolism
Module
scyt_M00165
Reductive pentose phosphate cycle (Calvin cycle)
scyt_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMD_69000
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SAMD_69000
Enzymes [BR:
scyt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
SAMD_69000
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
NarE
Motif
Other DBs
NCBI-ProteinID:
BAY49271
LinkDB
All DBs
Position
complement(8082715..8083050)
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AA seq
111 aa
AA seq
DB search
MQTLPKERRYETLSYLPPLSDAQIAKQIQYILNQGYIPAIEFNENSEPTVYYWTLWKLPL
FNARSTQEVVNEVQACRSQYGNNFIRVVGFDNIKQCQVLSFIVHKPNSSRY
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccctaccaaaagagcgtcgctacgaaaccctctcctacctgcctcccctctct
gatgctcagattgccaagcaaatccagtacattctgaaccaaggttacattccggcaatt
gagttcaacgagaattcggagccgacagtatattactggactctttggaaactgcctttg
tttaatgcaagatctactcaagaagtagtaaacgaagttcaagcttgccgttctcagtac
ggcaacaactttatccgcgtggtgggttttgacaacatcaagcagtgccaagttctcagc
tttatcgttcacaagcctaatagcagcagatactaa
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