Scytonema sp. HK-05: SAMD_69970
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Entry
SAMD_69970 CDS
T09974
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
scyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_69970
03070 Bacterial secretion system
SAMD_69970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_69970
02044 Secretion system [BR:
scyt02044
]
SAMD_69970
Transporters [BR:
scyt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMD_69970
Secretion system [BR:
scyt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMD_69970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
cNMP_binding
SMC_N
AAA_22
ABC_ATPase
AAA_21
AAA_30
AAA_29
DUF87
AAA_16
Zeta_toxin
AAA_18
KAP_NTPase
RsgA_GTPase
AAA_25
AAA_15
AAA_23
G-alpha
Motif
Other DBs
NCBI-ProteinID:
BAY49368
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All DBs
Position
8200663..8203614
Genome browser
AA seq
983 aa
AA seq
DB search
MTNTTIDIKEFFTDVFPFKHLPENVLENLLTKVQFLRYRMGQVIVTREVMPQQISIIYSG
QARLLGFDKRTEKPDTLKLLQPGEVVGWVSHVRGVACETVIASTEVICFSLAIADFLSVI
KHESAFAKALHQNAALVEVYELLGEELSRRADGKTDLVRLSRTAWEAAIVLTLPAAKDMR
SPLYKGDYLWLVSSSSQAEFPVGSPLELNGTNPKLYLNANMRLVGLPKSLLPALPERPPT
PTTADSWLAEIPYAPEIATKPESAKQSKRAKYPYIRARGPVDASLACFQMLSQYFNMPFR
RDMLRRVVTKQYERTSSISLQFCAAVAELMGLTTQIVKIPASTVSRLQPPVMISWQDSFA
IIYKTSNQELLIAVPEMGLVRRKSRDFAETWGQEGEVLLLQPTKETPKSRFGLSWFVPAL
RRHRKVLIEVLIASIVVQIFGLVNPLVTQVIIDKVLVGNSPDTLTVFGIFLIVVSVVEAV
LTNVRTHLFVDTTNRIDLSLGSEVINHLLRLPLSYFDRRPVGELATRVNELEHIRSFLTG
TALTVVMDAVFSVIYIFVMGIYSWVLSLVALATVPLFALLNLLVSPVMRRQLHEKAERNA
ETHSYLVEVMAGMQTVKAQNLEMRSRWQWQERYARYISAGFKTISTQTTAGSLSNFLNKL
SSLLVLWVGAYLVLNGQLTLGQLIAFRIISGYVTSPLLRLVQLWQNFQETALSLQRLSDI
LDSPQETEGERQNILMPAIEGHVRYENLSFGFRANGPLQLCNINLDFPAGSFIGVVGQSG
SGKSTLLKLLQRLYEPKSGKILIDGYDISKVELYSLRRQIGMVLQDTLLFDGTVRENIAL
AYPDASDEEIIAAAKIAYAHDFIMSLPNGYNTSVGERGSGLSGGQRQRIAIARTVLQNPQ
LLILDEATSALDYNAEGQVCRNLASAFKDKTVFFITHRLSSIRNADVILMMDQGAVVEQG
THKELMALKGYYYCLYQQQEAQM
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataccactattgatattaaagaattttttacagatgtatttcctttcaaacat
ctgcctgagaatgtactagaaaatttattaacaaaagtacaatttttgcgctaccgcatg
gggcaagtgatagtgacgcgggaagtgatgccccaacagattagcattatctactctggg
caagcccgcctgttaggcttcgacaaacgcacagagaaacctgacacgctgaagttgctg
caaccaggagaagttgtgggttgggtgagtcatgtgcggggcgtggcttgtgaaacagta
atagcctctacagaagtgatttgcttcagtttagcgatcgccgattttcttagtgtgatc
aagcacgagtcggcttttgcaaaggcgctgcaccaaaatgcagcattagtagaagtgtat
gagttgttgggcgaagaactcagtcggcgggctgatggcaagactgatttagttagacta
tcgcgaactgcttgggaagctgctattgtactcacacttcctgcagcaaaagatatgaga
tcccccctttataagggggattatctgtggctagtgagcagcagttctcaagctgagttt
ccggtaggtagccctctagagttgaacggtactaaccccaaactgtacctcaacgcaaat
atgcgtctggtaggtttacccaaatctttgctcccagcactaccagaaaggccaccaacg
ccaacaacagcagattcttggctagcagaaattccttacgccccagagattgccacaaaa
ccagaatcagccaagcagtctaaacgagcaaagtacccctacatccgggcacgaggtccg
gtggatgcatccttggcttgcttccagatgttgagccagtattttaatatgccgttccgc
cgagatatgctgcggcgggttgtgacgaaacagtatgaacgcaccagcagtatatctctg
caattttgcgctgcagtagcagagttgatggggttgacaacgcagatagtcaagattccc
gcgtctacagttagccgcttgcaacctccggtgatgatttcctggcaagacagttttgcc
atcatctacaaaaccagcaaccaagaattactcatcgccgttccagaaatgggactagtg
cgccgcaaatcccgagactttgccgaaacctggggacaagagggcgaagtgctgctgctg
caaccgacaaaagaaacccccaagtcgcggtttggtctttcgtggtttgtgcctgcatta
cgtcgccaccgtaaggtcctgattgaagtgctgattgcttctatcgtggtgcaaattttt
gggttggtgaatcccctagtcacacaggtgattatcgacaaagtcctggttggcaacagc
cctgacaccctgacagttttcggtatctttttgattgtagtgtcggtggtggaagcggta
ctcactaatgtccgcacccatttgtttgtggataccactaaccgtattgacctatcgcta
ggttctgaagttattaatcacttgttgcgtctgcccttatcttattttgatcggcgtcca
gtgggggaattggcaacccgagttaatgaactcgaacacattcgttccttccttacaggt
acggctttaacggtggtgatggatgcggtcttttcagtcatctacatcttcgtgatgggg
atttatagctgggtgctgtctttagtagcactagcaacagtaccgctgtttgccttgttg
aatttgttggtttctccagtcatgcggcgacagttacatgaaaaagccgaacgcaacgcc
gagacacactcctacttggtggaagtaatggcgggaatgcagacagtcaaggcgcaaaat
ttggagatgcgatcgcgttggcaatggcaagaacgctacgcccgctatatcagtgctggg
tttaagactatttctacccaaacaactgctggttctttaagcaatttcctcaataaactc
tccagtctgttggtgctgtgggtgggggcgtatcttgtcctcaacgggcaacttacccta
ggacaactcattgccttccgcatcatttccggctatgtcaccagccctctgctacggtta
gtgcaactgtggcagaatttccaagaaactgccctgtccctacaacgtctcagcgacatt
ctcgactcaccccaagaaacagaaggcgaacgtcaaaatatccttatgccggcaattgaa
ggtcacgtccgctacgaaaatctctctttcggcttccgtgcgaatggacctttgcaactg
tgcaacatcaacctagattttcctgctggttcctttataggcgttgtcggtcaaagcggt
tctgggaaaagtacactgctaaaattgctacaaaggctttacgaaccgaagtcagggaaa
atcttgatagacggctacgacatcagcaaagtggaactttattccctgcggcgtcagatt
ggcatggtactacaagataccttgctatttgacgggacagtgcgagaaaacattgccttg
gcgtatcctgatgctagtgatgaggagattattgctgctgccaaaattgcctatgcccat
gattttattatgtcgttgcccaacggctacaacacatctgtaggtgagcggggttcaggg
ctttctgggggacaaaggcaaaggattgcgatcgcccgcaccgtcctgcaaaatccccaa
ttgctgatcctcgatgaagccacaagcgccttagattacaacgcagaaggacaagtctgc
cgcaacttggcgtcagcattcaaagacaaaacagtattttttataactcataggttaagt
agtatccgtaatgccgacgtaattctcatgatggatcaaggcgcagtggtggaacaggga
acccacaaagaattaatggcgctgaagggttattactactgtttgtatcagcaacaagaa
gcgcagatgtag
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