Scytonema sp. HK-05: SAMD_70090
Help
Entry
SAMD_70090 CDS
T09974
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyt03016
]
SAMD_70090
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SAMD_70090
Transfer RNA biogenesis [BR:
scyt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SAMD_70090
Prokaryotic type
SAMD_70090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAY49380
LinkDB
All DBs
Position
complement(8216395..8217468)
Genome browser
AA seq
357 aa
AA seq
DB search
MLFLLRETFWQKKFAFFRATIENRKPNSARGRQNKAVQITFLGTSSGVPTRSRNVSSVAL
RLPQRAQLWLFDCGEGTQHQLLRSDLKSSQLSRIFITHMHGDHIFGLMGLLASCGLAGNV
QRVDIYGPSGLNDYLQAASRYSHTHFSYPVKVHAVRPGVIYEDDEFTVTCGLLHHRVTSF
GYRVCEKDRAGRFDVEKAKALQIPPGRIYGQLKRGEVVTLADGRVINGQELCGPTEIGRK
IAYCTDTVYCDGAVELAQDADVLIHEATFAHQDAEMAFQRLHSTTTMAAQTALAARARRL
IMTHFSPRYAPGNAIELKDLLEEARAIFPNTEMAYDFMTYEVPRRRDKELYKTEAIA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgttatttctactgagggagactttctggcaaaagaaatttgcttttttccgtgccact
atagagaatagaaagccaaattcagcaagaggaaggcaaaataaggctgtgcagataaca
tttctagggacgagttccggtgtacctacgcgatcgcgcaacgtttccagtgtcgccctg
aggttaccacaacgagctcagctgtggttattcgactgtggcgaagggactcagcatcaa
cttttgcggagtgacctaaaaagtagccaactctcccgaatttttatcacccatatgcac
ggcgaccatatttttggcttaatgggtcttttggctagttgcggcttagctggaaatgta
caacgtgttgatatctatggtccatctggattaaatgactacttgcaagccgcctcacgt
tactctcatactcacttttcctatcctgtcaaagttcacgctgtacgtccaggggtgatt
tacgaagatgatgaattcactgtaacgtgtggtcttttgcatcatcgcgtcacctccttt
ggctaccgcgtctgtgagaaagaccgagcaggacgttttgatgtagaaaaagccaaagcg
ttgcaaattcctcccggtcgcatttacggtcaactcaaacgcggtgaagtagtgaccctt
gctgatgggcgagtgattaacggtcaggaactgtgtggaccgacagaaattggacgcaaa
attgcttattgtacagacacagtttattgtgatggcgctgtggaattggcacaggatgca
gatgtattaattcatgaagcaaccttcgcccatcaagatgcagagatggcttttcaaagg
ttgcattccacaaccacaatggcggcgcaaaccgctttagccgcaagagcgcgccgactg
attatgacacattttagtccccgctatgctcctggaaatgcaatagagttgaaagattta
cttgaggaagctcgtgctatttttcctaacacagagatggcatatgattttatgacttat
gaagtaccaaggcggagggacaaggagttatataagactgaggcgatcgcttaa
DBGET
integrated database retrieval system
