Scytonema sp. HK-05: SAMD_70720
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Entry
SAMD_70720 CDS
T09974
Name
(GenBank) MscS mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_70720
Transporters [BR:
scyt02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMD_70720
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
BAY49443
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Position
8285848..8287422
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AA seq
524 aa
AA seq
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MNILILLAEVVFLILIFSLFNWLIGIIFRQFAKVSWFQGRTANITFLRRNISRLVIFTCV
VLCLALIAVNGMVIYRGGNVKEFQLNFIRSIPTQFWVNIVTASLKTVSLLILVKFSIPPL
HRGIDWVCDYAKKVDQIKANDESTEAFFRVLKRIITHTLWISSAILCAKFFYLPEIVSRY
LYIALKIYIIVTVGLLIVKAVATIVDTLDALSLKYSSSNNLLRLYERLRHLIPLFKKCLE
YVLYVAIVNLVVPEIEFIAWISAYTPTIVQIIGVFFISNVLIEVAYFILDEFYLKTTDSN
DSQRQKRLTLIPLMRSFAKYFIYFTAGVTILKLIGIDPAPILAGAGIVGIAVGLGAQNLI
NDVVCGFLILFENYYLVGDYIEAGKMQDRGVEGIVEAIELRTTHVRHPDGQLQIIRNGDI
GSIINYSKQYIYARVEISVSYDSNLDHVYRVVEKVGQQLKADEQDVLEPTRVAGIENFGE
DNLLLLTLTKVKPGKHLHIQRVLRKILKETFSQEEIEIYGFSKN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaatatactaattctcctggcagaagttgtatttttaatactcattttctccctgttt
aactggctgattggaataatcttcaggcagtttgctaaggtttcttggtttcaaggcaga
actgcaaatattaccttcctgcgccgcaatatcagcagacttgtgattttcacttgtgtg
gtgctgtgtcttgcgctgattgctgtgaatgggatggtgatttatcgaggcggaaacgta
aaggaattccaacttaacttcattcgcagtattccgactcaattctgggtcaatattgtt
acggcgagcttaaaaactgttagcctactgatactggttaagttcagcataccaccctta
caccggggtatagactgggtttgcgattacgccaagaaggttgatcaaatcaaggctaac
gatgagagtaccgaggctttttttagggtcttaaaaagaattatcactcatactctttgg
atatcatctgctatcttatgcgctaaatttttctaccttccagaaatcgtttccagatat
ctttacattgccttaaaaatctatatcattgtcacagttggtttactcattgtcaaagct
gttgctactatcgttgacacccttgatgcccttagtcttaaatactccagttctaacaat
ctgctgcgtttatacgagcgtttacgccacctgattccacttttcaaaaaatgtttggaa
tacgtcctctatgtcgccatagtaaatctcgttgttccagaaatagagtttatcgcttgg
ataagtgcttatacgcccacaattgttcagattattggggttttctttatcagcaatgtt
ttgatagaagtcgcctacttcatccttgatgagttctacctaaaaactacagattcaaat
gattcacagcgacagaaacggctgacgctcattccgttaatgcggagtttcgccaaatat
ttcatttatttcactgccggagttaccatactcaagctcattggcattgatcctgcgcct
atcttagcaggtgcaggaattgtaggtatagcagttggtcttggggcacaaaacctcatt
aatgatgtcgtttgtggatttttgatcctgtttgaaaactattacttggtgggtgactat
atcgaagcagggaaaatgcaagacagaggtgtcgaggggattgtggaggcgattgagttg
agaacgactcacgtccgacatcccgatggtcaattgcagattattcggaatggggatatt
ggatcaattatcaactattctaaacagtatatatatgcaagggtagaaattagcgtttcc
tatgactccaatttagatcatgtgtatagagtggttgagaaggtaggacagcagttaaag
gcggatgagcaggatgttctggaacccacgcgagtagctggaatagaaaactttggggaa
gataacctgttgcttctgacgctgacgaaggtcaagcctggaaaacaccttcatattcag
cgtgttctccgcaagatattaaaggaaacttttagtcaggaagaaattgaaatttacggt
ttttccaagaattga
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