Scytonema sp. HK-05: SAMD_72480
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Entry
SAMD_72480 CDS
T09974
Name
(GenBank) hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyt03009
]
SAMD_72480
Enzymes [BR:
scyt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SAMD_72480
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SAMD_72480
Ribosome biogenesis [BR:
scyt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMD_72480
23S rRNA modification factors
SAMD_72480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
BAY49619
LinkDB
All DBs
Position
complement(8469117..8469980)
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AA seq
287 aa
AA seq
DB search
MAKQRLDTLLVELNLCSSRALAQRLIQAGEVTVNDQVIDKPGTEVDVAAQIQIKERSRFV
SRGGEKLAKALEVFAIPVEGRICLDGGISTGGFTDCLLQAGAKLVYGVDVGYGQVDWGLR
NDSRVILKERTNLRYLKPEELYGVPPQTPPSEGGVYADLAVVDVSFISLTKILPALWQLL
QSPREAVLLVKPQFEVGKNRVGKKGVVRDPKDQADAIFQVLQAAGELGWKYKGLTWSPVT
GPAGNIEYLLWLGIESATPPPGLELIKQMTQSSAAHFLVSRKDEPGL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaacaacgactcgacactttattagtagaactcaatttatgctcttcccgtgcc
ttagcacagaggttaattcaggcgggggaagtgactgttaatgaccaggtgattgataag
ccggggactgaggttgatgttgcggcgcaaattcaaattaaagagcgatcgcgctttgtt
tccagaggcggcgaaaagttagcaaaagcattggaagtgtttgctattcctgtggaaggg
cgtatttgtttggatgggggtatttctacaggtggctttactgattgtctgctgcaagct
ggggcaaagctagtttacggcgttgatgttggttatggacaagttgactggggcttgcga
aatgattctcgggtgattttgaaggaacgcacgaatttacggtatttgaagccagaagag
ttgtatggtgtacctccccaaacccccccttctgaaggaggggtctacgctgatttggcg
gtggttgatgtgtcgtttatttcattaaccaagattttgcctgctttatggcagctgctg
caatctccccgtgaagctgtgttgttggtgaaaccccagtttgaagtggggaaaaaccgt
gtgggtaaaaaaggtgttgtgcgtgaccctaaagaccaagcagatgctatttttcaggtg
ttgcaagctgctggtgaattgggatggaagtacaagggtttaacttggtcgcctgtcact
ggtcctgctgggaatatagagtatctcttatggctgggaatagagagtgcaactccaccc
ccaggtttagaactcatcaaacaaatgactcaatcatctgccgcgcactttttagtttcg
cgcaaagacgagccagggctgtag
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