Scytonema sp. HK-05: SAMD_72570
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Entry
SAMD_72570 CDS
T09974
Name
(GenBank) allophycocyanin beta subunit
KO
K02097
phycobilisome core component
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00196
Photosynthesis - antenna proteins
scyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SAMD_72570
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
scyt00194
]
SAMD_72570
Photosynthesis proteins [BR:
scyt00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
SAMD_72570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phycobilisome
Motif
Other DBs
NCBI-ProteinID:
BAY49628
LinkDB
All DBs
Position
complement(8477842..8478351)
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AA seq
169 aa
AA seq
DB search
MRDAVTSLIKNYDVAGRYFDRNALDSLKSYFESGTARVQAAAAINSNAAALVKQAGSKLF
EEQPELIRPGGNAYTTRRYAACLRDMDYYLRYATYALVAGNTDVLDERVLQGLRETYNSL
GVPIGPTVLGIQIMKDIVKEQVAAAGVANTSFVDEPFDYMTRELSEQDI
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatgcagtgacaagtttaattaagaattatgacgttgcgggtcggtatttcgac
cggaatgcactcgacagcctcaagtcttactttgaaagtggtacggcacgcgtgcaagca
gcggcggctatcaattcaaatgcggcggcactagtcaagcaggctggttctaagttattt
gaagaacagcccgagttaattcgtcctggtgggaatgcctacacaactcgccgttatgcg
gcttgtctgcgggatatggactactacctgcgctatgctacctatgctcttgttgctggc
aatactgatgtgctggatgagcgtgtgttgcaagggctgcgcgaaacttacaattctcta
ggagtgccaattggtccaacggttctcggtatccaaattatgaaggatattgtgaaggag
caagtggctgcagcaggtgttgccaatacgagctttgtagatgagccgtttgactatatg
actagagagttgagcgaacaagatatctaa
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