Scytonema sp. HK-05: SAMD_79180
Help
Entry
SAMD_79180 CDS
T09974
Name
(GenBank) ABC transporter-related protein
Organism
scyt
Scytonema sp. HK-05
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_22
AAA_21
AAA_16
nSTAND1
RsgA_GTPase
AAA_14
AAA_33
MMR_HSR1
AAA_23
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAY50289
LinkDB
All DBs
Position
plasmid1:473374..475437
Genome browser
AA seq
687 aa
AA seq
DB search
MIAAGAVGRALGITIHPPAKSENLERVQNPIEAIARASRIRMRQIALTDNWWKKDVGPVL
TYMQEDDRPVAVLPIGDTRYEIVDPLKQTRIPVDSHSAALLTSTAYTFYRPLPEKIKTLS
LLQFALRGHFKELIVILLTGITVTLLGMLTPQATAILIDNAIPDANRGLLVQIALGLLVT
AFGGALFQLVQGFAIMRLETFADSSTQAAVWDRLLNLHASFFRQFSIGDLNARVSAITQI
RQKLSSTVLKSIFSSLFSLLNLGLLFYYSAQLAWIACVLALLNIAVTVFSGILTLQRFRS
LLNLQGKLFGVMVQLINGVTKLRVTGAESRAFAYWGKQYSHQLKLMLSTQGIEDNLAIVN
KVLPALTTAAIFWLATNLLHQSQMQGGSLSTGTFLAFNAAFGTFISGATSLSSTIVDVLQ
ILPLWKRAEPILLATPEVDSDKTDPGKLSGRLLVDHVVFRYRDDGPLTLDDVSIQVEPGE
FIALVGPSGSGKSTLFRLLLGFDIPESGTIYYDGQDLAGLDVNAVRRQLGVVIQNSRLTS
ASIFDNIASGALITMDEAWEASRMAGLAEDIEAMPMGMHTVVSEGGTNLSGGQRQRLLIA
RALVLKPQILFFDEATSALDNKTQAIVSESLERLKVTRVAIAHRLSTIRNADRIYVLQNG
RVVQQGSFEQLAHQEGLFAQLMHRQML
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttgattgcagcaggtgctgtgggacgggctttagggatcacgattcatccaccagccaag
tcagaaaacctcgaacgggtgcaaaatcctatagaggcgatcgcacgtgcctcacgtatc
cgaatgcgtcaaatagcgttgacggataactggtggaaaaaggatgttggtccggtactt
acctatatgcaggaagacgaccgtccagtagcagttttgcccattggggatactcgctat
gagattgttgatccactcaagcaaacccgcattcccgttgacagccacagtgctgcgctg
ctgacttcaactgcttacaccttttatcgaccgttacctgaaaagataaaaaccctgagt
ttgcttcagtttgcactgcgagggcatttcaaggaactgatcgtcatcctattgactgga
attaccgtaacattgttggggatgctcacgccccaagccacggcgatcttgattgacaac
gccattcctgatgcaaatcggggattattggtacaaatcgccttaggtttgttggtaaca
gcttttggtggagcactgtttcaactggttcagggatttgccattatgaggctggaaacg
tttgctgattcatcgacccaagcagctgtgtgggatcggctgttgaatctccatgcatct
ttctttcggcagttctcgattggtgatttaaatgcccgtgtctcagccatcactcaaatc
cgccagaagttgagtagcacagtacttaaaagtattttctctagtttattttcgttactc
aatctgggactactgttctattacagtgctcaattggcttggatagcttgtgttttggcg
ctgctcaatattgctgtcaccgtcttctctggcattctcaccctccagcggtttcgttct
ttgctgaatcttcaaggaaaactctttggcgtgatggtgcagttgatcaatggagtgacc
aaactgcgagtgactggagctgagtctagggcttttgcttactggggcaaacagtatagc
catcaactcaagctcatgctgagtacgcagggcattgaagacaaccttgctattgtcaat
aaggtgttgcctgcattaacaacggctgcaattttttggctcgctactaacttgctgcac
caatctcagatgcaaggaggtagtttgtctactggcacctttctagcatttaatgctgct
ttcggcacgtttattagcggtgcaacgagtttgagcagcaccatagtagatgttttgcag
attttgccattatggaaacgtgcagaaccaattcttttggcgacaccagaggttgattct
gataaaactgatccaggtaagttatcgggtcgtctgcttgttgatcatgtagtgttccgc
taccgagatgatggaccactcacactggatgatgtcagcatccaagttgaaccaggagag
tttattgcactggtgggaccgtctggaagcggcaaatcgaccttgttccgattattactt
gggtttgatatcccagaatctggcacgatttactatgacggacaagatttagctgggcta
gatgtgaatgcggtgcgccgacagctaggagtcgttatccaaaatagccgattgacctca
gcgtctatcttcgataacatcgccagtggtgctttgattacaatggatgaagcatgggaa
gcctcccggatggctggcttggcagaggatatcgaagcaatgccaatggggatgcacact
gttgttagtgagggaggtacgaacctttctggcggacaacgccaacgattgttgatagca
cgggcattggtattgaaaccccagattttgttctttgatgaagcaacgagtgccttagat
aacaaaacgcaggcgatcgtgagtgaaagcttggagcgactaaaagtgactcgggtggcg
atcgctcaccgacttagcacaatccgtaatgctgaccgcatttatgtgctccagaacggt
cgggtggtgcagcagggcagtttcgagcagttagctcatcaagaggggctgtttgctcag
cttatgcaccggcagatgctttga
DBGET
integrated database retrieval system
